Gene : Tp57577_TGAC_v2_gene8652 T. pratense v2
Defline:  (1 of 5) PTHR11771:SF42 - PROTEIN C13C4.7 Genomic Order:  2339
Name:  ? Tp57577_TGAC_v2_gene8652 Secondary Identifier:  ? PAC:35957333
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-5409 Trifolium pratense pathologic  
Tpratense PWY-5410 Trifolium pratense pathologic  
Tpratense PWY-735 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene8652 0.5kb upstream 0.5kb upstream 2654 true Tp57577_TGAC_v2_LG7: 20441373-20444026 Trifolium pratense
Tp57577_TGAC_v2_gene8652 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG7: 20441373-20441872 Trifolium pratense
Tp57577_TGAC_v2_gene8652 0.5kb downstream 0.5kb downstream 2654 true Tp57577_TGAC_v2_LG7: 20441873-20444526 Trifolium pratense
Tp57577_TGAC_v2_gene8652 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG7: 20444027-20444526 Trifolium pratense
Tp57577_TGAC_v2_gene8652 1.0kb upstream 1.0kb upstream 3154 true Tp57577_TGAC_v2_LG7: 20440873-20444026 Trifolium pratense
Tp57577_TGAC_v2_gene8652 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG7: 20440873-20441872 Trifolium pratense
Tp57577_TGAC_v2_gene8652 1.0kb downstream 1.0kb downstream 3154 true Tp57577_TGAC_v2_LG7: 20441873-20445026 Trifolium pratense
Tp57577_TGAC_v2_gene8652 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG7: 20444027-20445026 Trifolium pratense
Tp57577_TGAC_v2_gene8652 2.0kb upstream 2.0kb upstream 4154 true Tp57577_TGAC_v2_LG7: 20439873-20444026 Trifolium pratense
Tp57577_TGAC_v2_gene8652 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG7: 20439873-20441872 Trifolium pratense
Tp57577_TGAC_v2_gene8652 2.0kb downstream 2.0kb downstream 4154 true Tp57577_TGAC_v2_LG7: 20441873-20446026 Trifolium pratense
Tp57577_TGAC_v2_gene8652 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG7: 20444027-20446026 Trifolium pratense
Tp57577_TGAC_v2_gene8652 5.0kb upstream 5.0kb upstream 7154 true Tp57577_TGAC_v2_LG7: 20436873-20444026 Trifolium pratense
Tp57577_TGAC_v2_gene8652 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG7: 20436873-20441872 Trifolium pratense
Tp57577_TGAC_v2_gene8652 5.0kb downstream 5.0kb downstream 7154 true Tp57577_TGAC_v2_LG7: 20441873-20449026 Trifolium pratense
Tp57577_TGAC_v2_gene8652 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG7: 20444027-20449026 Trifolium pratense
Tp57577_TGAC_v2_gene8652 10.0kb upstream 10.0kb upstream 12154 true Tp57577_TGAC_v2_LG7: 20431873-20444026 Trifolium pratense
Tp57577_TGAC_v2_gene8652 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG7: 20431873-20441872 Trifolium pratense
Tp57577_TGAC_v2_gene8652 10.0kb downstream 10.0kb downstream 12154 true Tp57577_TGAC_v2_LG7: 20441873-20454026 Trifolium pratense
Tp57577_TGAC_v2_gene8652 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG7: 20444027-20454026 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313161 5265 Fabidae View MSA
124071264 5270 Rosid View MSA
123750087 5271 Pentapetalae View MSA
122788853 5272 Eudicot View MSA
122051623 5273 Angiosperm View MSA
123429188 5275 Viridiplantae View MSA
121351701 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain