Gene : Tp57577_TGAC_v2_gene29042 T. pratense v2
Defline:  (1 of 2) K18467 - vacuolar protein sorting-associated protein 29 (VPS29) Genomic Order:  5
Name:  ? Tp57577_TGAC_v2_gene29042 Secondary Identifier:  ? PAC:35960964
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene29042 0.5kb upstream 0.5kb upstream 4187 true Tp57577_TGAC_v2_scaf_1003: 31927-36113 Trifolium pratense
Tp57577_TGAC_v2_gene29042 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_1003: 31927-32426 Trifolium pratense
Tp57577_TGAC_v2_gene29042 0.5kb downstream 0.5kb downstream 4187 true Tp57577_TGAC_v2_scaf_1003: 32427-36613 Trifolium pratense
Tp57577_TGAC_v2_gene29042 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_1003: 36114-36613 Trifolium pratense
Tp57577_TGAC_v2_gene29042 1.0kb upstream 1.0kb upstream 4687 true Tp57577_TGAC_v2_scaf_1003: 31427-36113 Trifolium pratense
Tp57577_TGAC_v2_gene29042 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_1003: 31427-32426 Trifolium pratense
Tp57577_TGAC_v2_gene29042 1.0kb downstream 1.0kb downstream 4687 true Tp57577_TGAC_v2_scaf_1003: 32427-37113 Trifolium pratense
Tp57577_TGAC_v2_gene29042 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_1003: 36114-37113 Trifolium pratense
Tp57577_TGAC_v2_gene29042 2.0kb upstream 2.0kb upstream 5687 true Tp57577_TGAC_v2_scaf_1003: 30427-36113 Trifolium pratense
Tp57577_TGAC_v2_gene29042 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_1003: 30427-32426 Trifolium pratense
Tp57577_TGAC_v2_gene29042 2.0kb downstream 2.0kb downstream 5687 true Tp57577_TGAC_v2_scaf_1003: 32427-38113 Trifolium pratense
Tp57577_TGAC_v2_gene29042 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_1003: 36114-38113 Trifolium pratense
Tp57577_TGAC_v2_gene29042 5.0kb upstream 5.0kb upstream 8687 true Tp57577_TGAC_v2_scaf_1003: 27427-36113 Trifolium pratense
Tp57577_TGAC_v2_gene29042 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_1003: 27427-32426 Trifolium pratense
Tp57577_TGAC_v2_gene29042 5.0kb downstream 5.0kb downstream 8687 true Tp57577_TGAC_v2_scaf_1003: 32427-41113 Trifolium pratense
Tp57577_TGAC_v2_gene29042 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_1003: 36114-41113 Trifolium pratense
Tp57577_TGAC_v2_gene29042 10.0kb upstream 10.0kb upstream 13687 true Tp57577_TGAC_v2_scaf_1003: 22427-36113 Trifolium pratense
Tp57577_TGAC_v2_gene29042 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_1003: 22427-32426 Trifolium pratense
Tp57577_TGAC_v2_gene29042 10.0kb downstream 10.0kb downstream 13687 true Tp57577_TGAC_v2_scaf_1003: 32427-46113 Trifolium pratense
Tp57577_TGAC_v2_gene29042 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_1003: 36114-46113 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307032 5265 Fabidae View MSA
124071774 5270 Rosid View MSA
123736460 5271 Pentapetalae View MSA
122787236 5272 Eudicot View MSA
122043646 5273 Angiosperm View MSA
121346806 5274 Embryophyte View MSA
123424212 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain