Gene : Tp57577_TGAC_v2_gene28477 T. pratense v2
Defline:  (1 of 29) PF00407 - Pathogenesis-related protein Bet v I family (Bet_v_1) Genomic Order:  5
Name:  ? Tp57577_TGAC_v2_gene28477 Secondary Identifier:  ? PAC:35960292
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene28477 0.5kb upstream 0.5kb upstream 20356 true Tp57577_TGAC_v2_scaf_1024: 19594-39949 Trifolium pratense
Tp57577_TGAC_v2_gene28477 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_1024: 39450-39949 Trifolium pratense
Tp57577_TGAC_v2_gene28477 0.5kb downstream 0.5kb downstream 20356 true Tp57577_TGAC_v2_scaf_1024: 19094-39449 Trifolium pratense
Tp57577_TGAC_v2_gene28477 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_1024: 19094-19593 Trifolium pratense
Tp57577_TGAC_v2_gene28477 1.0kb upstream 1.0kb upstream 20856 true Tp57577_TGAC_v2_scaf_1024: 19594-40449 Trifolium pratense
Tp57577_TGAC_v2_gene28477 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_1024: 39450-40449 Trifolium pratense
Tp57577_TGAC_v2_gene28477 1.0kb downstream 1.0kb downstream 20856 true Tp57577_TGAC_v2_scaf_1024: 18594-39449 Trifolium pratense
Tp57577_TGAC_v2_gene28477 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_1024: 18594-19593 Trifolium pratense
Tp57577_TGAC_v2_gene28477 2.0kb upstream 2.0kb upstream 21856 true Tp57577_TGAC_v2_scaf_1024: 19594-41449 Trifolium pratense
Tp57577_TGAC_v2_gene28477 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_1024: 39450-41449 Trifolium pratense
Tp57577_TGAC_v2_gene28477 2.0kb downstream 2.0kb downstream 21856 true Tp57577_TGAC_v2_scaf_1024: 17594-39449 Trifolium pratense
Tp57577_TGAC_v2_gene28477 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_1024: 17594-19593 Trifolium pratense
Tp57577_TGAC_v2_gene28477 5.0kb upstream 5.0kb upstream 24856 true Tp57577_TGAC_v2_scaf_1024: 19594-44449 Trifolium pratense
Tp57577_TGAC_v2_gene28477 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_1024: 39450-44449 Trifolium pratense
Tp57577_TGAC_v2_gene28477 5.0kb downstream 5.0kb downstream 24856 true Tp57577_TGAC_v2_scaf_1024: 14594-39449 Trifolium pratense
Tp57577_TGAC_v2_gene28477 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_1024: 14594-19593 Trifolium pratense
Tp57577_TGAC_v2_gene28477 10.0kb upstream 10.0kb upstream 29856 true Tp57577_TGAC_v2_scaf_1024: 19594-49449 Trifolium pratense
Tp57577_TGAC_v2_gene28477 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_1024: 39450-49449 Trifolium pratense
Tp57577_TGAC_v2_gene28477 10.0kb downstream 10.0kb downstream 29856 true Tp57577_TGAC_v2_scaf_1024: 9594-39449 Trifolium pratense
Tp57577_TGAC_v2_gene28477 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_1024: 9594-19593 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315508 5265 Fabidae View MSA
124072279 5270 Rosid View MSA
123752390 5271 Pentapetalae View MSA
122797871 5272 Eudicot View MSA
122048225 5273 Angiosperm View MSA
121351454 5274 Embryophyte View MSA
123382173 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain