Gene : Tp57577_TGAC_v2_gene28525 T. pratense v2
Defline:  (1 of 16) PTHR11746//PTHR11746:SF103 - O-METHYLTRANSFERASE // SUBFAMILY NOT NAMED Genomic Order:  2
Name:  ? Tp57577_TGAC_v2_gene28525 Secondary Identifier:  ? PAC:35962217
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-1121 Trifolium pratense pathologic  
Tpratense PWY-2181 Trifolium pratense pathologic  
Tpratense PWY-361 Trifolium pratense pathologic  
Tpratense PWY-7186 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene28525 0.5kb upstream 0.5kb upstream 1132 true Tp57577_TGAC_v2_scaf_1039: 9726-10857 Trifolium pratense
Tp57577_TGAC_v2_gene28525 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_1039: 9726-10225 Trifolium pratense
Tp57577_TGAC_v2_gene28525 0.5kb downstream 0.5kb downstream 1132 true Tp57577_TGAC_v2_scaf_1039: 10226-11357 Trifolium pratense
Tp57577_TGAC_v2_gene28525 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_1039: 10858-11357 Trifolium pratense
Tp57577_TGAC_v2_gene28525 1.0kb upstream 1.0kb upstream 1632 true Tp57577_TGAC_v2_scaf_1039: 9226-10857 Trifolium pratense
Tp57577_TGAC_v2_gene28525 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_1039: 9226-10225 Trifolium pratense
Tp57577_TGAC_v2_gene28525 1.0kb downstream 1.0kb downstream 1632 true Tp57577_TGAC_v2_scaf_1039: 10226-11857 Trifolium pratense
Tp57577_TGAC_v2_gene28525 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_1039: 10858-11857 Trifolium pratense
Tp57577_TGAC_v2_gene28525 2.0kb upstream 2.0kb upstream 2632 true Tp57577_TGAC_v2_scaf_1039: 8226-10857 Trifolium pratense
Tp57577_TGAC_v2_gene28525 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_1039: 8226-10225 Trifolium pratense
Tp57577_TGAC_v2_gene28525 2.0kb downstream 2.0kb downstream 2632 true Tp57577_TGAC_v2_scaf_1039: 10226-12857 Trifolium pratense
Tp57577_TGAC_v2_gene28525 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_1039: 10858-12857 Trifolium pratense
Tp57577_TGAC_v2_gene28525 5.0kb upstream 5.0kb upstream 5632 true Tp57577_TGAC_v2_scaf_1039: 5226-10857 Trifolium pratense
Tp57577_TGAC_v2_gene28525 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_1039: 5226-10225 Trifolium pratense
Tp57577_TGAC_v2_gene28525 5.0kb downstream 5.0kb downstream 5632 true Tp57577_TGAC_v2_scaf_1039: 10226-15857 Trifolium pratense
Tp57577_TGAC_v2_gene28525 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_1039: 10858-15857 Trifolium pratense
Tp57577_TGAC_v2_gene28525 10.0kb upstream 10.0kb upstream 10632 true Tp57577_TGAC_v2_scaf_1039: 226-10857 Trifolium pratense
Tp57577_TGAC_v2_gene28525 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_1039: 226-10225 Trifolium pratense
Tp57577_TGAC_v2_gene28525 10.0kb downstream 10.0kb downstream 10632 true Tp57577_TGAC_v2_scaf_1039: 10226-20857 Trifolium pratense
Tp57577_TGAC_v2_gene28525 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_1039: 10858-20857 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313866 5265 Fabidae View MSA
124051926 5270 Rosid View MSA
123743880 5271 Pentapetalae View MSA
122796941 5272 Eudicot View MSA
122050650 5273 Angiosperm View MSA
123429068 5275 Viridiplantae View MSA
121350689 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain