Gene : Tp57577_TGAC_v2_gene33954 T. pratense v2
Defline:  (1 of 4) K15559 - regulator of Ty1 transposition protein 103 (RTT103) Genomic Order:  16
Name:  ? Tp57577_TGAC_v2_gene33954 Secondary Identifier:  ? PAC:35973678
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene33954 0.5kb upstream 0.5kb upstream 20001 true Tp57577_TGAC_v2_scaf_106: 207445-227445 Trifolium pratense
Tp57577_TGAC_v2_gene33954 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_106: 226946-227445 Trifolium pratense
Tp57577_TGAC_v2_gene33954 0.5kb downstream 0.5kb downstream 20001 true Tp57577_TGAC_v2_scaf_106: 206945-226945 Trifolium pratense
Tp57577_TGAC_v2_gene33954 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_106: 206945-207444 Trifolium pratense
Tp57577_TGAC_v2_gene33954 1.0kb upstream 1.0kb upstream 20501 true Tp57577_TGAC_v2_scaf_106: 207445-227945 Trifolium pratense
Tp57577_TGAC_v2_gene33954 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_106: 226946-227945 Trifolium pratense
Tp57577_TGAC_v2_gene33954 1.0kb downstream 1.0kb downstream 20501 true Tp57577_TGAC_v2_scaf_106: 206445-226945 Trifolium pratense
Tp57577_TGAC_v2_gene33954 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_106: 206445-207444 Trifolium pratense
Tp57577_TGAC_v2_gene33954 2.0kb upstream 2.0kb upstream 21501 true Tp57577_TGAC_v2_scaf_106: 207445-228945 Trifolium pratense
Tp57577_TGAC_v2_gene33954 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_106: 226946-228945 Trifolium pratense
Tp57577_TGAC_v2_gene33954 2.0kb downstream 2.0kb downstream 21501 true Tp57577_TGAC_v2_scaf_106: 205445-226945 Trifolium pratense
Tp57577_TGAC_v2_gene33954 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_106: 205445-207444 Trifolium pratense
Tp57577_TGAC_v2_gene33954 5.0kb upstream 5.0kb upstream 24501 true Tp57577_TGAC_v2_scaf_106: 207445-231945 Trifolium pratense
Tp57577_TGAC_v2_gene33954 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_106: 226946-231945 Trifolium pratense
Tp57577_TGAC_v2_gene33954 5.0kb downstream 5.0kb downstream 24501 true Tp57577_TGAC_v2_scaf_106: 202445-226945 Trifolium pratense
Tp57577_TGAC_v2_gene33954 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_106: 202445-207444 Trifolium pratense
Tp57577_TGAC_v2_gene33954 10.0kb upstream 10.0kb upstream 29501 true Tp57577_TGAC_v2_scaf_106: 207445-236945 Trifolium pratense
Tp57577_TGAC_v2_gene33954 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_106: 226946-236945 Trifolium pratense
Tp57577_TGAC_v2_gene33954 10.0kb downstream 10.0kb downstream 29501 true Tp57577_TGAC_v2_scaf_106: 197445-226945 Trifolium pratense
Tp57577_TGAC_v2_gene33954 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_106: 197445-207444 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302415 5265 Fabidae View MSA
124070749 5270 Rosid View MSA
123742286 5271 Pentapetalae View MSA
122795416 5272 Eudicot View MSA
122049571 5273 Angiosperm View MSA
123428880 5275 Viridiplantae View MSA
121348039 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain