Gene : Tp57577_TGAC_v2_gene31033 T. pratense v2
Defline:  (1 of 1) PF01609 - Transposase DDE domain (DDE_Tnp_1) Genomic Order:  3
Name:  ? Tp57577_TGAC_v2_gene31033 Secondary Identifier:  ? PAC:35986337
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene31033 0.5kb upstream 0.5kb upstream 15562 true Tp57577_TGAC_v2_scaf_1118: 16318-31879 Trifolium pratense
Tp57577_TGAC_v2_gene31033 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_1118: 16318-16817 Trifolium pratense
Tp57577_TGAC_v2_gene31033 0.5kb downstream 0.5kb downstream 15562 true Tp57577_TGAC_v2_scaf_1118: 16818-32379 Trifolium pratense
Tp57577_TGAC_v2_gene31033 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_1118: 31880-32379 Trifolium pratense
Tp57577_TGAC_v2_gene31033 1.0kb upstream 1.0kb upstream 16062 true Tp57577_TGAC_v2_scaf_1118: 15818-31879 Trifolium pratense
Tp57577_TGAC_v2_gene31033 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_1118: 15818-16817 Trifolium pratense
Tp57577_TGAC_v2_gene31033 1.0kb downstream 1.0kb downstream 16062 true Tp57577_TGAC_v2_scaf_1118: 16818-32879 Trifolium pratense
Tp57577_TGAC_v2_gene31033 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_1118: 31880-32879 Trifolium pratense
Tp57577_TGAC_v2_gene31033 2.0kb upstream 2.0kb upstream 17062 true Tp57577_TGAC_v2_scaf_1118: 14818-31879 Trifolium pratense
Tp57577_TGAC_v2_gene31033 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_1118: 14818-16817 Trifolium pratense
Tp57577_TGAC_v2_gene31033 2.0kb downstream 2.0kb downstream 17062 true Tp57577_TGAC_v2_scaf_1118: 16818-33879 Trifolium pratense
Tp57577_TGAC_v2_gene31033 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_1118: 31880-33879 Trifolium pratense
Tp57577_TGAC_v2_gene31033 5.0kb upstream 5.0kb upstream 20062 true Tp57577_TGAC_v2_scaf_1118: 11818-31879 Trifolium pratense
Tp57577_TGAC_v2_gene31033 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_1118: 11818-16817 Trifolium pratense
Tp57577_TGAC_v2_gene31033 5.0kb downstream 5.0kb downstream 20062 true Tp57577_TGAC_v2_scaf_1118: 16818-36879 Trifolium pratense
Tp57577_TGAC_v2_gene31033 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_1118: 31880-36879 Trifolium pratense
Tp57577_TGAC_v2_gene31033 10.0kb upstream 10.0kb upstream 25062 true Tp57577_TGAC_v2_scaf_1118: 6818-31879 Trifolium pratense
Tp57577_TGAC_v2_gene31033 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_1118: 6818-16817 Trifolium pratense
Tp57577_TGAC_v2_gene31033 10.0kb downstream 10.0kb downstream 25062 true Tp57577_TGAC_v2_scaf_1118: 16818-41879 Trifolium pratense
Tp57577_TGAC_v2_gene31033 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_1118: 31880-41879 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121645622 5273 Angiosperm Singleton cluster - no MSA
122284537 5265 Fabidae Singleton cluster - no MSA
124025051 5270 Rosid Singleton cluster - no MSA
123598887 5271 Pentapetalae Singleton cluster - no MSA
122633578 5272 Eudicot Singleton cluster - no MSA
120917725 5274 Embryophyte Singleton cluster - no MSA
122958374 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain