Gene : Tp57577_TGAC_v2_gene31156 T. pratense v2
Defline:  (1 of 2) PF00642//PF12796 - Zinc finger C-x8-C-x5-C-x3-H type (and similar) (zf-CCCH) // Ankyrin repeats (3 copies) (Ank_2) Genomic Order:  2
Name:  ? Tp57577_TGAC_v2_gene31156 Secondary Identifier:  ? PAC:35977448
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene31156 0.5kb upstream 0.5kb upstream 4524 true Tp57577_TGAC_v2_scaf_1131: 12602-17125 Trifolium pratense
Tp57577_TGAC_v2_gene31156 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_1131: 16626-17125 Trifolium pratense
Tp57577_TGAC_v2_gene31156 0.5kb downstream 0.5kb downstream 4524 true Tp57577_TGAC_v2_scaf_1131: 12102-16625 Trifolium pratense
Tp57577_TGAC_v2_gene31156 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_1131: 12102-12601 Trifolium pratense
Tp57577_TGAC_v2_gene31156 1.0kb upstream 1.0kb upstream 5024 true Tp57577_TGAC_v2_scaf_1131: 12602-17625 Trifolium pratense
Tp57577_TGAC_v2_gene31156 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_1131: 16626-17625 Trifolium pratense
Tp57577_TGAC_v2_gene31156 1.0kb downstream 1.0kb downstream 5024 true Tp57577_TGAC_v2_scaf_1131: 11602-16625 Trifolium pratense
Tp57577_TGAC_v2_gene31156 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_1131: 11602-12601 Trifolium pratense
Tp57577_TGAC_v2_gene31156 2.0kb upstream 2.0kb upstream 6024 true Tp57577_TGAC_v2_scaf_1131: 12602-18625 Trifolium pratense
Tp57577_TGAC_v2_gene31156 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_1131: 16626-18625 Trifolium pratense
Tp57577_TGAC_v2_gene31156 2.0kb downstream 2.0kb downstream 6024 true Tp57577_TGAC_v2_scaf_1131: 10602-16625 Trifolium pratense
Tp57577_TGAC_v2_gene31156 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_1131: 10602-12601 Trifolium pratense
Tp57577_TGAC_v2_gene31156 5.0kb upstream 5.0kb upstream 9024 true Tp57577_TGAC_v2_scaf_1131: 12602-21625 Trifolium pratense
Tp57577_TGAC_v2_gene31156 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_1131: 16626-21625 Trifolium pratense
Tp57577_TGAC_v2_gene31156 5.0kb downstream 5.0kb downstream 9024 true Tp57577_TGAC_v2_scaf_1131: 7602-16625 Trifolium pratense
Tp57577_TGAC_v2_gene31156 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_1131: 7602-12601 Trifolium pratense
Tp57577_TGAC_v2_gene31156 10.0kb upstream 10.0kb upstream 14024 true Tp57577_TGAC_v2_scaf_1131: 12602-26625 Trifolium pratense
Tp57577_TGAC_v2_gene31156 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_1131: 16626-26625 Trifolium pratense
Tp57577_TGAC_v2_gene31156 10.0kb downstream 10.0kb downstream 14024 true Tp57577_TGAC_v2_scaf_1131: 2602-16625 Trifolium pratense
Tp57577_TGAC_v2_gene31156 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_1131: 2602-12601 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314270 5265 Fabidae View MSA
124070984 5270 Rosid View MSA
123746400 5271 Pentapetalae View MSA
122787606 5272 Eudicot View MSA
122046013 5273 Angiosperm View MSA
123429052 5275 Viridiplantae View MSA
121351105 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain