Gene : Tp57577_TGAC_v2_gene29499 T. pratense v2
Defline:  (1 of 2) PTHR31618:SF7 - MECHANOSENSITIVE ION CHANNEL PROTEIN 4-RELATED Genomic Order:  3
Name:  ? Tp57577_TGAC_v2_gene29499 Secondary Identifier:  ? PAC:35983036
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene29499 0.5kb upstream 0.5kb upstream 4832 true Tp57577_TGAC_v2_scaf_1178: 9486-14317 Trifolium pratense
Tp57577_TGAC_v2_gene29499 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_1178: 9486-9985 Trifolium pratense
Tp57577_TGAC_v2_gene29499 0.5kb downstream 0.5kb downstream 4832 true Tp57577_TGAC_v2_scaf_1178: 9986-14817 Trifolium pratense
Tp57577_TGAC_v2_gene29499 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_1178: 14318-14817 Trifolium pratense
Tp57577_TGAC_v2_gene29499 1.0kb upstream 1.0kb upstream 5332 true Tp57577_TGAC_v2_scaf_1178: 8986-14317 Trifolium pratense
Tp57577_TGAC_v2_gene29499 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_1178: 8986-9985 Trifolium pratense
Tp57577_TGAC_v2_gene29499 1.0kb downstream 1.0kb downstream 5332 true Tp57577_TGAC_v2_scaf_1178: 9986-15317 Trifolium pratense
Tp57577_TGAC_v2_gene29499 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_1178: 14318-15317 Trifolium pratense
Tp57577_TGAC_v2_gene29499 2.0kb upstream 2.0kb upstream 6332 true Tp57577_TGAC_v2_scaf_1178: 7986-14317 Trifolium pratense
Tp57577_TGAC_v2_gene29499 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_1178: 7986-9985 Trifolium pratense
Tp57577_TGAC_v2_gene29499 2.0kb downstream 2.0kb downstream 6332 true Tp57577_TGAC_v2_scaf_1178: 9986-16317 Trifolium pratense
Tp57577_TGAC_v2_gene29499 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_1178: 14318-16317 Trifolium pratense
Tp57577_TGAC_v2_gene29499 5.0kb upstream 5.0kb upstream 9332 true Tp57577_TGAC_v2_scaf_1178: 4986-14317 Trifolium pratense
Tp57577_TGAC_v2_gene29499 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_1178: 4986-9985 Trifolium pratense
Tp57577_TGAC_v2_gene29499 5.0kb downstream 5.0kb downstream 9332 true Tp57577_TGAC_v2_scaf_1178: 9986-19317 Trifolium pratense
Tp57577_TGAC_v2_gene29499 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_1178: 14318-19317 Trifolium pratense
Tp57577_TGAC_v2_gene29499 10.0kb upstream 10.0kb upstream 14317 true Tp57577_TGAC_v2_scaf_1178: 1-14317 Trifolium pratense
Tp57577_TGAC_v2_gene29499 10.0kb upstream 10.0kb upstream 9985 false Tp57577_TGAC_v2_scaf_1178: 1-9985 Trifolium pratense
Tp57577_TGAC_v2_gene29499 10.0kb downstream 10.0kb downstream 14332 true Tp57577_TGAC_v2_scaf_1178: 9986-24317 Trifolium pratense
Tp57577_TGAC_v2_gene29499 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_1178: 14318-24317 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041489 5273 Angiosperm View MSA
122304321 5265 Fabidae View MSA
124069991 5270 Rosid View MSA
123753249 5271 Pentapetalae View MSA
122794299 5272 Eudicot View MSA
121309858 5274 Embryophyte View MSA
123428857 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain