Gene : Tp57577_TGAC_v2_gene20572 T. pratense v2
Defline:  (1 of 4) K17710 - pentatricopeptide repeat domain-containing protein 1 (PTCD1) Genomic Order:  3
Name:  ? Tp57577_TGAC_v2_gene20572 Secondary Identifier:  ? PAC:35977998
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene20572 0.5kb upstream 0.5kb upstream 4439 true Tp57577_TGAC_v2_scaf_1212: 30347-34785 Trifolium pratense
Tp57577_TGAC_v2_gene20572 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_1212: 34286-34785 Trifolium pratense
Tp57577_TGAC_v2_gene20572 0.5kb downstream 0.5kb downstream 4439 true Tp57577_TGAC_v2_scaf_1212: 29847-34285 Trifolium pratense
Tp57577_TGAC_v2_gene20572 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_1212: 29847-30346 Trifolium pratense
Tp57577_TGAC_v2_gene20572 1.0kb upstream 1.0kb upstream 4939 true Tp57577_TGAC_v2_scaf_1212: 30347-35285 Trifolium pratense
Tp57577_TGAC_v2_gene20572 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_1212: 34286-35285 Trifolium pratense
Tp57577_TGAC_v2_gene20572 1.0kb downstream 1.0kb downstream 4939 true Tp57577_TGAC_v2_scaf_1212: 29347-34285 Trifolium pratense
Tp57577_TGAC_v2_gene20572 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_1212: 29347-30346 Trifolium pratense
Tp57577_TGAC_v2_gene20572 2.0kb upstream 2.0kb upstream 5939 true Tp57577_TGAC_v2_scaf_1212: 30347-36285 Trifolium pratense
Tp57577_TGAC_v2_gene20572 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_1212: 34286-36285 Trifolium pratense
Tp57577_TGAC_v2_gene20572 2.0kb downstream 2.0kb downstream 5939 true Tp57577_TGAC_v2_scaf_1212: 28347-34285 Trifolium pratense
Tp57577_TGAC_v2_gene20572 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_1212: 28347-30346 Trifolium pratense
Tp57577_TGAC_v2_gene20572 5.0kb upstream 5.0kb upstream 8939 true Tp57577_TGAC_v2_scaf_1212: 30347-39285 Trifolium pratense
Tp57577_TGAC_v2_gene20572 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_1212: 34286-39285 Trifolium pratense
Tp57577_TGAC_v2_gene20572 5.0kb downstream 5.0kb downstream 8939 true Tp57577_TGAC_v2_scaf_1212: 25347-34285 Trifolium pratense
Tp57577_TGAC_v2_gene20572 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_1212: 25347-30346 Trifolium pratense
Tp57577_TGAC_v2_gene20572 10.0kb upstream 10.0kb upstream 11311 true Tp57577_TGAC_v2_scaf_1212: 30347-41657 Trifolium pratense
Tp57577_TGAC_v2_gene20572 10.0kb upstream 10.0kb upstream 7372 false Tp57577_TGAC_v2_scaf_1212: 34286-41657 Trifolium pratense
Tp57577_TGAC_v2_gene20572 10.0kb downstream 10.0kb downstream 13939 true Tp57577_TGAC_v2_scaf_1212: 20347-34285 Trifolium pratense
Tp57577_TGAC_v2_gene20572 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_1212: 20347-30346 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309903 5265 Fabidae View MSA
124065938 5270 Rosid View MSA
123738887 5271 Pentapetalae View MSA
122785902 5272 Eudicot View MSA
122051295 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121349652 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain