Gene : Tp57577_TGAC_v2_gene29252 T. pratense v2
Defline:  (1 of 2) K14328 - regulator of nonsense transcripts 3 (UPF3, RENT3) Genomic Order:  5
Name:  ? Tp57577_TGAC_v2_gene29252 Secondary Identifier:  ? PAC:35990875
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene29252 0.5kb upstream 0.5kb upstream 6264 true Tp57577_TGAC_v2_scaf_1192: 36590-42853 Trifolium pratense
Tp57577_TGAC_v2_gene29252 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_1192: 42354-42853 Trifolium pratense
Tp57577_TGAC_v2_gene29252 0.5kb downstream 0.5kb downstream 6264 true Tp57577_TGAC_v2_scaf_1192: 36090-42353 Trifolium pratense
Tp57577_TGAC_v2_gene29252 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_1192: 36090-36589 Trifolium pratense
Tp57577_TGAC_v2_gene29252 1.0kb upstream 1.0kb upstream 6764 true Tp57577_TGAC_v2_scaf_1192: 36590-43353 Trifolium pratense
Tp57577_TGAC_v2_gene29252 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_1192: 42354-43353 Trifolium pratense
Tp57577_TGAC_v2_gene29252 1.0kb downstream 1.0kb downstream 6764 true Tp57577_TGAC_v2_scaf_1192: 35590-42353 Trifolium pratense
Tp57577_TGAC_v2_gene29252 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_1192: 35590-36589 Trifolium pratense
Tp57577_TGAC_v2_gene29252 2.0kb upstream 2.0kb upstream 6846 true Tp57577_TGAC_v2_scaf_1192: 36590-43435 Trifolium pratense
Tp57577_TGAC_v2_gene29252 2.0kb upstream 2.0kb upstream 1082 false Tp57577_TGAC_v2_scaf_1192: 42354-43435 Trifolium pratense
Tp57577_TGAC_v2_gene29252 2.0kb downstream 2.0kb downstream 7764 true Tp57577_TGAC_v2_scaf_1192: 34590-42353 Trifolium pratense
Tp57577_TGAC_v2_gene29252 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_1192: 34590-36589 Trifolium pratense
Tp57577_TGAC_v2_gene29252 5.0kb upstream 5.0kb upstream 6846 true Tp57577_TGAC_v2_scaf_1192: 36590-43435 Trifolium pratense
Tp57577_TGAC_v2_gene29252 5.0kb upstream 5.0kb upstream 1082 false Tp57577_TGAC_v2_scaf_1192: 42354-43435 Trifolium pratense
Tp57577_TGAC_v2_gene29252 5.0kb downstream 5.0kb downstream 10764 true Tp57577_TGAC_v2_scaf_1192: 31590-42353 Trifolium pratense
Tp57577_TGAC_v2_gene29252 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_1192: 31590-36589 Trifolium pratense
Tp57577_TGAC_v2_gene29252 10.0kb upstream 10.0kb upstream 6846 true Tp57577_TGAC_v2_scaf_1192: 36590-43435 Trifolium pratense
Tp57577_TGAC_v2_gene29252 10.0kb upstream 10.0kb upstream 1082 false Tp57577_TGAC_v2_scaf_1192: 42354-43435 Trifolium pratense
Tp57577_TGAC_v2_gene29252 10.0kb downstream 10.0kb downstream 15764 true Tp57577_TGAC_v2_scaf_1192: 26590-42353 Trifolium pratense
Tp57577_TGAC_v2_gene29252 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_1192: 26590-36589 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041498 5273 Angiosperm View MSA
122300753 5265 Fabidae View MSA
124070961 5270 Rosid View MSA
123750498 5271 Pentapetalae View MSA
122788511 5272 Eudicot View MSA
121351189 5274 Embryophyte View MSA
123425600 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain