Gene : Tp57577_TGAC_v2_gene17980 T. pratense v2
Defline:  (1 of 29) PF00197 - Trypsin and protease inhibitor (Kunitz_legume) Genomic Order:  1
Name:  ? Tp57577_TGAC_v2_gene17980 Secondary Identifier:  ? PAC:35990911
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene17980 0.5kb upstream 0.5kb upstream 1485 true Tp57577_TGAC_v2_scaf_1301: 11311-12795 Trifolium pratense
Tp57577_TGAC_v2_gene17980 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_1301: 12296-12795 Trifolium pratense
Tp57577_TGAC_v2_gene17980 0.5kb downstream 0.5kb downstream 1485 true Tp57577_TGAC_v2_scaf_1301: 10811-12295 Trifolium pratense
Tp57577_TGAC_v2_gene17980 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_1301: 10811-11310 Trifolium pratense
Tp57577_TGAC_v2_gene17980 1.0kb upstream 1.0kb upstream 1985 true Tp57577_TGAC_v2_scaf_1301: 11311-13295 Trifolium pratense
Tp57577_TGAC_v2_gene17980 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_1301: 12296-13295 Trifolium pratense
Tp57577_TGAC_v2_gene17980 1.0kb downstream 1.0kb downstream 1985 true Tp57577_TGAC_v2_scaf_1301: 10311-12295 Trifolium pratense
Tp57577_TGAC_v2_gene17980 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_1301: 10311-11310 Trifolium pratense
Tp57577_TGAC_v2_gene17980 2.0kb upstream 2.0kb upstream 2985 true Tp57577_TGAC_v2_scaf_1301: 11311-14295 Trifolium pratense
Tp57577_TGAC_v2_gene17980 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_1301: 12296-14295 Trifolium pratense
Tp57577_TGAC_v2_gene17980 2.0kb downstream 2.0kb downstream 2985 true Tp57577_TGAC_v2_scaf_1301: 9311-12295 Trifolium pratense
Tp57577_TGAC_v2_gene17980 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_1301: 9311-11310 Trifolium pratense
Tp57577_TGAC_v2_gene17980 5.0kb upstream 5.0kb upstream 5985 true Tp57577_TGAC_v2_scaf_1301: 11311-17295 Trifolium pratense
Tp57577_TGAC_v2_gene17980 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_1301: 12296-17295 Trifolium pratense
Tp57577_TGAC_v2_gene17980 5.0kb downstream 5.0kb downstream 5985 true Tp57577_TGAC_v2_scaf_1301: 6311-12295 Trifolium pratense
Tp57577_TGAC_v2_gene17980 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_1301: 6311-11310 Trifolium pratense
Tp57577_TGAC_v2_gene17980 10.0kb upstream 10.0kb upstream 10985 true Tp57577_TGAC_v2_scaf_1301: 11311-22295 Trifolium pratense
Tp57577_TGAC_v2_gene17980 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_1301: 12296-22295 Trifolium pratense
Tp57577_TGAC_v2_gene17980 10.0kb downstream 10.0kb downstream 10985 true Tp57577_TGAC_v2_scaf_1301: 1311-12295 Trifolium pratense
Tp57577_TGAC_v2_gene17980 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_1301: 1311-11310 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309979 5265 Fabidae View MSA
124070415 5270 Rosid View MSA
123749279 5271 Pentapetalae View MSA
122795954 5272 Eudicot View MSA
122043570 5273 Angiosperm View MSA
121310150 5274 Embryophyte View MSA
123347719 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain