Gene : Tp57577_TGAC_v2_gene17993 T. pratense v2
Defline:  (1 of 62) PF03195 - Protein of unknown function DUF260 (DUF260) Genomic Order:  1
Name:  ? Tp57577_TGAC_v2_gene17993 Secondary Identifier:  ? PAC:35977919
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene17993 0.5kb upstream 0.5kb upstream 3103 true Tp57577_TGAC_v2_scaf_1307: 5693-8795 Trifolium pratense
Tp57577_TGAC_v2_gene17993 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_1307: 8296-8795 Trifolium pratense
Tp57577_TGAC_v2_gene17993 0.5kb downstream 0.5kb downstream 3103 true Tp57577_TGAC_v2_scaf_1307: 5193-8295 Trifolium pratense
Tp57577_TGAC_v2_gene17993 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_1307: 5193-5692 Trifolium pratense
Tp57577_TGAC_v2_gene17993 1.0kb upstream 1.0kb upstream 3603 true Tp57577_TGAC_v2_scaf_1307: 5693-9295 Trifolium pratense
Tp57577_TGAC_v2_gene17993 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_1307: 8296-9295 Trifolium pratense
Tp57577_TGAC_v2_gene17993 1.0kb downstream 1.0kb downstream 3603 true Tp57577_TGAC_v2_scaf_1307: 4693-8295 Trifolium pratense
Tp57577_TGAC_v2_gene17993 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_1307: 4693-5692 Trifolium pratense
Tp57577_TGAC_v2_gene17993 2.0kb upstream 2.0kb upstream 4603 true Tp57577_TGAC_v2_scaf_1307: 5693-10295 Trifolium pratense
Tp57577_TGAC_v2_gene17993 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_1307: 8296-10295 Trifolium pratense
Tp57577_TGAC_v2_gene17993 2.0kb downstream 2.0kb downstream 4603 true Tp57577_TGAC_v2_scaf_1307: 3693-8295 Trifolium pratense
Tp57577_TGAC_v2_gene17993 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_1307: 3693-5692 Trifolium pratense
Tp57577_TGAC_v2_gene17993 5.0kb upstream 5.0kb upstream 7603 true Tp57577_TGAC_v2_scaf_1307: 5693-13295 Trifolium pratense
Tp57577_TGAC_v2_gene17993 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_1307: 8296-13295 Trifolium pratense
Tp57577_TGAC_v2_gene17993 5.0kb downstream 5.0kb downstream 7603 true Tp57577_TGAC_v2_scaf_1307: 693-8295 Trifolium pratense
Tp57577_TGAC_v2_gene17993 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_1307: 693-5692 Trifolium pratense
Tp57577_TGAC_v2_gene17993 10.0kb upstream 10.0kb upstream 12603 true Tp57577_TGAC_v2_scaf_1307: 5693-18295 Trifolium pratense
Tp57577_TGAC_v2_gene17993 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_1307: 8296-18295 Trifolium pratense
Tp57577_TGAC_v2_gene17993 10.0kb downstream 10.0kb downstream 8295 true Tp57577_TGAC_v2_scaf_1307: 1-8295 Trifolium pratense
Tp57577_TGAC_v2_gene17993 10.0kb downstream 10.0kb downstream 5692 false Tp57577_TGAC_v2_scaf_1307: 1-5692 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313203 5265 Fabidae View MSA
124070294 5270 Rosid View MSA
123752210 5271 Pentapetalae View MSA
122796223 5272 Eudicot View MSA
122048133 5273 Angiosperm View MSA
121350574 5274 Embryophyte View MSA
123381803 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain