Gene : Tp57577_TGAC_v2_gene21385 T. pratense v2
Defline:  (1 of 4) PTHR10209:SF146 - 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED Genomic Order:  14
Name:  ? Tp57577_TGAC_v2_gene21385 Secondary Identifier:  ? PAC:35977205
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense ETHYL-PWY Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene21385 0.5kb upstream 0.5kb upstream 4725 true Tp57577_TGAC_v2_scaf_373: 123696-128420 Trifolium pratense
Tp57577_TGAC_v2_gene21385 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_373: 123696-124195 Trifolium pratense
Tp57577_TGAC_v2_gene21385 0.5kb downstream 0.5kb downstream 4725 true Tp57577_TGAC_v2_scaf_373: 124196-128920 Trifolium pratense
Tp57577_TGAC_v2_gene21385 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_373: 128421-128920 Trifolium pratense
Tp57577_TGAC_v2_gene21385 1.0kb upstream 1.0kb upstream 5225 true Tp57577_TGAC_v2_scaf_373: 123196-128420 Trifolium pratense
Tp57577_TGAC_v2_gene21385 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_373: 123196-124195 Trifolium pratense
Tp57577_TGAC_v2_gene21385 1.0kb downstream 1.0kb downstream 5225 true Tp57577_TGAC_v2_scaf_373: 124196-129420 Trifolium pratense
Tp57577_TGAC_v2_gene21385 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_373: 128421-129420 Trifolium pratense
Tp57577_TGAC_v2_gene21385 2.0kb upstream 2.0kb upstream 6225 true Tp57577_TGAC_v2_scaf_373: 122196-128420 Trifolium pratense
Tp57577_TGAC_v2_gene21385 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_373: 122196-124195 Trifolium pratense
Tp57577_TGAC_v2_gene21385 2.0kb downstream 2.0kb downstream 6225 true Tp57577_TGAC_v2_scaf_373: 124196-130420 Trifolium pratense
Tp57577_TGAC_v2_gene21385 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_373: 128421-130420 Trifolium pratense
Tp57577_TGAC_v2_gene21385 5.0kb upstream 5.0kb upstream 9225 true Tp57577_TGAC_v2_scaf_373: 119196-128420 Trifolium pratense
Tp57577_TGAC_v2_gene21385 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_373: 119196-124195 Trifolium pratense
Tp57577_TGAC_v2_gene21385 5.0kb downstream 5.0kb downstream 9225 true Tp57577_TGAC_v2_scaf_373: 124196-133420 Trifolium pratense
Tp57577_TGAC_v2_gene21385 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_373: 128421-133420 Trifolium pratense
Tp57577_TGAC_v2_gene21385 10.0kb upstream 10.0kb upstream 14225 true Tp57577_TGAC_v2_scaf_373: 114196-128420 Trifolium pratense
Tp57577_TGAC_v2_gene21385 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_373: 114196-124195 Trifolium pratense
Tp57577_TGAC_v2_gene21385 10.0kb downstream 10.0kb downstream 14225 true Tp57577_TGAC_v2_scaf_373: 124196-138420 Trifolium pratense
Tp57577_TGAC_v2_gene21385 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_373: 128421-138420 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302067 5265 Fabidae View MSA
124061088 5270 Rosid View MSA
123745959 5271 Pentapetalae View MSA
122787426 5272 Eudicot View MSA
122044176 5273 Angiosperm View MSA
123429101 5275 Viridiplantae View MSA
121345815 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain