Gene : Tp57577_TGAC_v2_gene312 T. pratense v2
Defline:  (1 of 1) PTHR23241:SF50 - LATE EMBRYOGENESIS ABUNDANT DOMAIN-CONTAINING PROTEIN-RELATED Genomic Order:  1
Name:  ? Tp57577_TGAC_v2_gene312 Secondary Identifier:  ? PAC:35960815
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene312 0.5kb upstream 0.5kb upstream 964 true Tp57577_TGAC_v2_scaf_12963: 681-1644 Trifolium pratense
Tp57577_TGAC_v2_gene312 0.5kb upstream 0.5kb upstream 1 false Tp57577_TGAC_v2_scaf_12963: 1644-1644 Trifolium pratense
Tp57577_TGAC_v2_gene312 0.5kb downstream 0.5kb downstream 1463 true Tp57577_TGAC_v2_scaf_12963: 181-1643 Trifolium pratense
Tp57577_TGAC_v2_gene312 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_12963: 181-680 Trifolium pratense
Tp57577_TGAC_v2_gene312 1.0kb upstream 1.0kb upstream 964 true Tp57577_TGAC_v2_scaf_12963: 681-1644 Trifolium pratense
Tp57577_TGAC_v2_gene312 1.0kb upstream 1.0kb upstream 1 false Tp57577_TGAC_v2_scaf_12963: 1644-1644 Trifolium pratense
Tp57577_TGAC_v2_gene312 1.0kb downstream 1.0kb downstream 1643 true Tp57577_TGAC_v2_scaf_12963: 1-1643 Trifolium pratense
Tp57577_TGAC_v2_gene312 1.0kb downstream 1.0kb downstream 680 false Tp57577_TGAC_v2_scaf_12963: 1-680 Trifolium pratense
Tp57577_TGAC_v2_gene312 2.0kb upstream 2.0kb upstream 964 true Tp57577_TGAC_v2_scaf_12963: 681-1644 Trifolium pratense
Tp57577_TGAC_v2_gene312 2.0kb upstream 2.0kb upstream 1 false Tp57577_TGAC_v2_scaf_12963: 1644-1644 Trifolium pratense
Tp57577_TGAC_v2_gene312 2.0kb downstream 2.0kb downstream 1643 true Tp57577_TGAC_v2_scaf_12963: 1-1643 Trifolium pratense
Tp57577_TGAC_v2_gene312 2.0kb downstream 2.0kb downstream 680 false Tp57577_TGAC_v2_scaf_12963: 1-680 Trifolium pratense
Tp57577_TGAC_v2_gene312 5.0kb upstream 5.0kb upstream 964 true Tp57577_TGAC_v2_scaf_12963: 681-1644 Trifolium pratense
Tp57577_TGAC_v2_gene312 5.0kb upstream 5.0kb upstream 1 false Tp57577_TGAC_v2_scaf_12963: 1644-1644 Trifolium pratense
Tp57577_TGAC_v2_gene312 5.0kb downstream 5.0kb downstream 1643 true Tp57577_TGAC_v2_scaf_12963: 1-1643 Trifolium pratense
Tp57577_TGAC_v2_gene312 5.0kb downstream 5.0kb downstream 680 false Tp57577_TGAC_v2_scaf_12963: 1-680 Trifolium pratense
Tp57577_TGAC_v2_gene312 10.0kb upstream 10.0kb upstream 964 true Tp57577_TGAC_v2_scaf_12963: 681-1644 Trifolium pratense
Tp57577_TGAC_v2_gene312 10.0kb upstream 10.0kb upstream 1 false Tp57577_TGAC_v2_scaf_12963: 1644-1644 Trifolium pratense
Tp57577_TGAC_v2_gene312 10.0kb downstream 10.0kb downstream 1643 true Tp57577_TGAC_v2_scaf_12963: 1-1643 Trifolium pratense
Tp57577_TGAC_v2_gene312 10.0kb downstream 10.0kb downstream 680 false Tp57577_TGAC_v2_scaf_12963: 1-680 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310946 5265 Fabidae View MSA
124072864 5270 Rosid View MSA
123741808 5271 Pentapetalae View MSA
122794616 5272 Eudicot View MSA
122045721 5273 Angiosperm View MSA
121349691 5274 Embryophyte View MSA
123428296 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain