Gene : Tp57577_TGAC_v2_gene19324 T. pratense v2
Defline:  (1 of 1) PTHR11451:SF32 - THREONYL-TRNA SYNTHETASE / THREONINE--TRNA LIGASE-RELATED Genomic Order:  2
Name:  ? Tp57577_TGAC_v2_gene19324 Secondary Identifier:  ? PAC:35953220
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense TRNA-CHARGING-PWY Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene19324 0.5kb upstream 0.5kb upstream 6139 true Tp57577_TGAC_v2_scaf_333: 31757-37895 Trifolium pratense
Tp57577_TGAC_v2_gene19324 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_333: 37396-37895 Trifolium pratense
Tp57577_TGAC_v2_gene19324 0.5kb downstream 0.5kb downstream 6139 true Tp57577_TGAC_v2_scaf_333: 31257-37395 Trifolium pratense
Tp57577_TGAC_v2_gene19324 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_333: 31257-31756 Trifolium pratense
Tp57577_TGAC_v2_gene19324 1.0kb upstream 1.0kb upstream 6639 true Tp57577_TGAC_v2_scaf_333: 31757-38395 Trifolium pratense
Tp57577_TGAC_v2_gene19324 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_333: 37396-38395 Trifolium pratense
Tp57577_TGAC_v2_gene19324 1.0kb downstream 1.0kb downstream 6639 true Tp57577_TGAC_v2_scaf_333: 30757-37395 Trifolium pratense
Tp57577_TGAC_v2_gene19324 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_333: 30757-31756 Trifolium pratense
Tp57577_TGAC_v2_gene19324 2.0kb upstream 2.0kb upstream 7639 true Tp57577_TGAC_v2_scaf_333: 31757-39395 Trifolium pratense
Tp57577_TGAC_v2_gene19324 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_333: 37396-39395 Trifolium pratense
Tp57577_TGAC_v2_gene19324 2.0kb downstream 2.0kb downstream 7639 true Tp57577_TGAC_v2_scaf_333: 29757-37395 Trifolium pratense
Tp57577_TGAC_v2_gene19324 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_333: 29757-31756 Trifolium pratense
Tp57577_TGAC_v2_gene19324 5.0kb upstream 5.0kb upstream 10639 true Tp57577_TGAC_v2_scaf_333: 31757-42395 Trifolium pratense
Tp57577_TGAC_v2_gene19324 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_333: 37396-42395 Trifolium pratense
Tp57577_TGAC_v2_gene19324 5.0kb downstream 5.0kb downstream 10639 true Tp57577_TGAC_v2_scaf_333: 26757-37395 Trifolium pratense
Tp57577_TGAC_v2_gene19324 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_333: 26757-31756 Trifolium pratense
Tp57577_TGAC_v2_gene19324 10.0kb upstream 10.0kb upstream 15639 true Tp57577_TGAC_v2_scaf_333: 31757-47395 Trifolium pratense
Tp57577_TGAC_v2_gene19324 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_333: 37396-47395 Trifolium pratense
Tp57577_TGAC_v2_gene19324 10.0kb downstream 10.0kb downstream 15639 true Tp57577_TGAC_v2_scaf_333: 21757-37395 Trifolium pratense
Tp57577_TGAC_v2_gene19324 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_333: 21757-31756 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300516 5265 Fabidae View MSA
124062778 5270 Rosid View MSA
123739350 5271 Pentapetalae View MSA
122793542 5272 Eudicot View MSA
122044606 5273 Angiosperm View MSA
121343894 5274 Embryophyte View MSA
123425201 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain