Gene : Tp57577_TGAC_v2_gene8694 T. pratense v2
Defline:  (1 of 216) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  2
Name:  ? Tp57577_TGAC_v2_gene8694 Secondary Identifier:  ? PAC:35977694
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene8694 0.5kb upstream 0.5kb upstream 6835 true Tp57577_TGAC_v2_scaf_516: 5516-12350 Trifolium pratense
Tp57577_TGAC_v2_gene8694 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_516: 11851-12350 Trifolium pratense
Tp57577_TGAC_v2_gene8694 0.5kb downstream 0.5kb downstream 6835 true Tp57577_TGAC_v2_scaf_516: 5016-11850 Trifolium pratense
Tp57577_TGAC_v2_gene8694 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_516: 5016-5515 Trifolium pratense
Tp57577_TGAC_v2_gene8694 1.0kb upstream 1.0kb upstream 7335 true Tp57577_TGAC_v2_scaf_516: 5516-12850 Trifolium pratense
Tp57577_TGAC_v2_gene8694 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_516: 11851-12850 Trifolium pratense
Tp57577_TGAC_v2_gene8694 1.0kb downstream 1.0kb downstream 7335 true Tp57577_TGAC_v2_scaf_516: 4516-11850 Trifolium pratense
Tp57577_TGAC_v2_gene8694 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_516: 4516-5515 Trifolium pratense
Tp57577_TGAC_v2_gene8694 2.0kb upstream 2.0kb upstream 8335 true Tp57577_TGAC_v2_scaf_516: 5516-13850 Trifolium pratense
Tp57577_TGAC_v2_gene8694 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_516: 11851-13850 Trifolium pratense
Tp57577_TGAC_v2_gene8694 2.0kb downstream 2.0kb downstream 8335 true Tp57577_TGAC_v2_scaf_516: 3516-11850 Trifolium pratense
Tp57577_TGAC_v2_gene8694 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_516: 3516-5515 Trifolium pratense
Tp57577_TGAC_v2_gene8694 5.0kb upstream 5.0kb upstream 11335 true Tp57577_TGAC_v2_scaf_516: 5516-16850 Trifolium pratense
Tp57577_TGAC_v2_gene8694 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_516: 11851-16850 Trifolium pratense
Tp57577_TGAC_v2_gene8694 5.0kb downstream 5.0kb downstream 11335 true Tp57577_TGAC_v2_scaf_516: 516-11850 Trifolium pratense
Tp57577_TGAC_v2_gene8694 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_516: 516-5515 Trifolium pratense
Tp57577_TGAC_v2_gene8694 10.0kb upstream 10.0kb upstream 16335 true Tp57577_TGAC_v2_scaf_516: 5516-21850 Trifolium pratense
Tp57577_TGAC_v2_gene8694 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_516: 11851-21850 Trifolium pratense
Tp57577_TGAC_v2_gene8694 10.0kb downstream 10.0kb downstream 11850 true Tp57577_TGAC_v2_scaf_516: 1-11850 Trifolium pratense
Tp57577_TGAC_v2_gene8694 10.0kb downstream 10.0kb downstream 5515 false Tp57577_TGAC_v2_scaf_516: 1-5515 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305765 5265 Fabidae View MSA
124067995 5270 Rosid View MSA
123737960 5271 Pentapetalae View MSA
122786713 5272 Eudicot View MSA
122046332 5273 Angiosperm View MSA
121347677 5274 Embryophyte View MSA
123426917 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain