Gene : Tp57577_TGAC_v2_gene14863 T. pratense v2
Defline:  (1 of 1) PTHR15561 - CALCITONIN GENE-RELATED PEPTIDE-RECEPTOR COMPONENT PROTEIN Genomic Order:  3
Name:  ? Tp57577_TGAC_v2_gene14863 Secondary Identifier:  ? PAC:35967401
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense ARO-PWY Trifolium pratense pathologic  
Tpratense PWY-6163 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene14863 0.5kb upstream 0.5kb upstream 3222 true Tp57577_TGAC_v2_scaf_596: 33276-36497 Trifolium pratense
Tp57577_TGAC_v2_gene14863 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_596: 33276-33775 Trifolium pratense
Tp57577_TGAC_v2_gene14863 0.5kb downstream 0.5kb downstream 3222 true Tp57577_TGAC_v2_scaf_596: 33776-36997 Trifolium pratense
Tp57577_TGAC_v2_gene14863 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_596: 36498-36997 Trifolium pratense
Tp57577_TGAC_v2_gene14863 1.0kb upstream 1.0kb upstream 3722 true Tp57577_TGAC_v2_scaf_596: 32776-36497 Trifolium pratense
Tp57577_TGAC_v2_gene14863 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_596: 32776-33775 Trifolium pratense
Tp57577_TGAC_v2_gene14863 1.0kb downstream 1.0kb downstream 3722 true Tp57577_TGAC_v2_scaf_596: 33776-37497 Trifolium pratense
Tp57577_TGAC_v2_gene14863 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_596: 36498-37497 Trifolium pratense
Tp57577_TGAC_v2_gene14863 2.0kb upstream 2.0kb upstream 4722 true Tp57577_TGAC_v2_scaf_596: 31776-36497 Trifolium pratense
Tp57577_TGAC_v2_gene14863 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_596: 31776-33775 Trifolium pratense
Tp57577_TGAC_v2_gene14863 2.0kb downstream 2.0kb downstream 4722 true Tp57577_TGAC_v2_scaf_596: 33776-38497 Trifolium pratense
Tp57577_TGAC_v2_gene14863 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_596: 36498-38497 Trifolium pratense
Tp57577_TGAC_v2_gene14863 5.0kb upstream 5.0kb upstream 7722 true Tp57577_TGAC_v2_scaf_596: 28776-36497 Trifolium pratense
Tp57577_TGAC_v2_gene14863 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_596: 28776-33775 Trifolium pratense
Tp57577_TGAC_v2_gene14863 5.0kb downstream 5.0kb downstream 7722 true Tp57577_TGAC_v2_scaf_596: 33776-41497 Trifolium pratense
Tp57577_TGAC_v2_gene14863 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_596: 36498-41497 Trifolium pratense
Tp57577_TGAC_v2_gene14863 10.0kb upstream 10.0kb upstream 12722 true Tp57577_TGAC_v2_scaf_596: 23776-36497 Trifolium pratense
Tp57577_TGAC_v2_gene14863 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_596: 23776-33775 Trifolium pratense
Tp57577_TGAC_v2_gene14863 10.0kb downstream 10.0kb downstream 12722 true Tp57577_TGAC_v2_scaf_596: 33776-46497 Trifolium pratense
Tp57577_TGAC_v2_gene14863 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_596: 36498-46497 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305183 5265 Fabidae View MSA
124063506 5270 Rosid View MSA
123740278 5271 Pentapetalae View MSA
122796140 5272 Eudicot View MSA
122047210 5273 Angiosperm View MSA
121347420 5274 Embryophyte View MSA
123427400 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain