Gene : Tp57577_TGAC_v2_gene13587 T. pratense v2
Defline:  (1 of 3) PTHR23315:SF116 - U-BOX DOMAIN-CONTAINING PROTEIN 18-RELATED Genomic Order:  8
Name:  ? Tp57577_TGAC_v2_gene13587 Secondary Identifier:  ? PAC:35982153
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-7511 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene13587 0.5kb upstream 0.5kb upstream 2783 true Tp57577_TGAC_v2_scaf_423: 83523-86305 Trifolium pratense
Tp57577_TGAC_v2_gene13587 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_423: 85806-86305 Trifolium pratense
Tp57577_TGAC_v2_gene13587 0.5kb downstream 0.5kb downstream 2783 true Tp57577_TGAC_v2_scaf_423: 83023-85805 Trifolium pratense
Tp57577_TGAC_v2_gene13587 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_423: 83023-83522 Trifolium pratense
Tp57577_TGAC_v2_gene13587 1.0kb upstream 1.0kb upstream 3283 true Tp57577_TGAC_v2_scaf_423: 83523-86805 Trifolium pratense
Tp57577_TGAC_v2_gene13587 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_423: 85806-86805 Trifolium pratense
Tp57577_TGAC_v2_gene13587 1.0kb downstream 1.0kb downstream 3283 true Tp57577_TGAC_v2_scaf_423: 82523-85805 Trifolium pratense
Tp57577_TGAC_v2_gene13587 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_423: 82523-83522 Trifolium pratense
Tp57577_TGAC_v2_gene13587 2.0kb upstream 2.0kb upstream 4283 true Tp57577_TGAC_v2_scaf_423: 83523-87805 Trifolium pratense
Tp57577_TGAC_v2_gene13587 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_423: 85806-87805 Trifolium pratense
Tp57577_TGAC_v2_gene13587 2.0kb downstream 2.0kb downstream 4283 true Tp57577_TGAC_v2_scaf_423: 81523-85805 Trifolium pratense
Tp57577_TGAC_v2_gene13587 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_423: 81523-83522 Trifolium pratense
Tp57577_TGAC_v2_gene13587 5.0kb upstream 5.0kb upstream 7283 true Tp57577_TGAC_v2_scaf_423: 83523-90805 Trifolium pratense
Tp57577_TGAC_v2_gene13587 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_423: 85806-90805 Trifolium pratense
Tp57577_TGAC_v2_gene13587 5.0kb downstream 5.0kb downstream 7283 true Tp57577_TGAC_v2_scaf_423: 78523-85805 Trifolium pratense
Tp57577_TGAC_v2_gene13587 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_423: 78523-83522 Trifolium pratense
Tp57577_TGAC_v2_gene13587 10.0kb upstream 10.0kb upstream 12283 true Tp57577_TGAC_v2_scaf_423: 83523-95805 Trifolium pratense
Tp57577_TGAC_v2_gene13587 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_423: 85806-95805 Trifolium pratense
Tp57577_TGAC_v2_gene13587 10.0kb downstream 10.0kb downstream 12283 true Tp57577_TGAC_v2_scaf_423: 73523-85805 Trifolium pratense
Tp57577_TGAC_v2_gene13587 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_423: 73523-83522 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304189 5265 Fabidae View MSA
124069612 5270 Rosid View MSA
123741587 5271 Pentapetalae View MSA
122786622 5272 Eudicot View MSA
122046188 5273 Angiosperm View MSA
121310571 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain