Gene : Tp57577_TGAC_v2_gene28153 T. pratense v2
Defline:  (1 of 3) PTHR11751:SF284 - 1-AMINOCYCLOPROPANE-1-CARBOXYLATE SYNTHASE-LIKE PROTEIN 1 Genomic Order:  8
Name:  ? Tp57577_TGAC_v2_gene28153 Secondary Identifier:  ? PAC:35967025
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense ETHYL-PWY Trifolium pratense pathologic  
Tpratense PWY-7270 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene28153 0.5kb upstream 0.5kb upstream 5231 true Tp57577_TGAC_v2_scaf_899: 70555-75785 Trifolium pratense
Tp57577_TGAC_v2_gene28153 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_899: 75286-75785 Trifolium pratense
Tp57577_TGAC_v2_gene28153 0.5kb downstream 0.5kb downstream 5231 true Tp57577_TGAC_v2_scaf_899: 70055-75285 Trifolium pratense
Tp57577_TGAC_v2_gene28153 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_899: 70055-70554 Trifolium pratense
Tp57577_TGAC_v2_gene28153 1.0kb upstream 1.0kb upstream 5731 true Tp57577_TGAC_v2_scaf_899: 70555-76285 Trifolium pratense
Tp57577_TGAC_v2_gene28153 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_899: 75286-76285 Trifolium pratense
Tp57577_TGAC_v2_gene28153 1.0kb downstream 1.0kb downstream 5731 true Tp57577_TGAC_v2_scaf_899: 69555-75285 Trifolium pratense
Tp57577_TGAC_v2_gene28153 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_899: 69555-70554 Trifolium pratense
Tp57577_TGAC_v2_gene28153 2.0kb upstream 2.0kb upstream 6731 true Tp57577_TGAC_v2_scaf_899: 70555-77285 Trifolium pratense
Tp57577_TGAC_v2_gene28153 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_899: 75286-77285 Trifolium pratense
Tp57577_TGAC_v2_gene28153 2.0kb downstream 2.0kb downstream 6731 true Tp57577_TGAC_v2_scaf_899: 68555-75285 Trifolium pratense
Tp57577_TGAC_v2_gene28153 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_899: 68555-70554 Trifolium pratense
Tp57577_TGAC_v2_gene28153 5.0kb upstream 5.0kb upstream 9686 true Tp57577_TGAC_v2_scaf_899: 70555-80240 Trifolium pratense
Tp57577_TGAC_v2_gene28153 5.0kb upstream 5.0kb upstream 4955 false Tp57577_TGAC_v2_scaf_899: 75286-80240 Trifolium pratense
Tp57577_TGAC_v2_gene28153 5.0kb downstream 5.0kb downstream 9731 true Tp57577_TGAC_v2_scaf_899: 65555-75285 Trifolium pratense
Tp57577_TGAC_v2_gene28153 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_899: 65555-70554 Trifolium pratense
Tp57577_TGAC_v2_gene28153 10.0kb upstream 10.0kb upstream 9686 true Tp57577_TGAC_v2_scaf_899: 70555-80240 Trifolium pratense
Tp57577_TGAC_v2_gene28153 10.0kb upstream 10.0kb upstream 4955 false Tp57577_TGAC_v2_scaf_899: 75286-80240 Trifolium pratense
Tp57577_TGAC_v2_gene28153 10.0kb downstream 10.0kb downstream 14731 true Tp57577_TGAC_v2_scaf_899: 60555-75285 Trifolium pratense
Tp57577_TGAC_v2_gene28153 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_899: 60555-70554 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297875 5265 Fabidae View MSA
124064739 5270 Rosid View MSA
123742797 5271 Pentapetalae View MSA
122787155 5272 Eudicot View MSA
122050094 5273 Angiosperm View MSA
121311735 5274 Embryophyte View MSA
123428176 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain