Gene : Tp57577_TGAC_v2_gene13972 T. pratense v2
Defline:  (1 of 1) PTHR12197:SF173 - CARBOXYLATE CLAMP-TETRATRICOPEPTIDE REPEAT PROTEIN Genomic Order:  1
Name:  ? Tp57577_TGAC_v2_gene13972 Secondary Identifier:  ? PAC:35951887
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene13972 0.5kb upstream 0.5kb upstream 12073 true Tp57577_TGAC_v2_scaf_417: 2736-14808 Trifolium pratense
Tp57577_TGAC_v2_gene13972 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_417: 2736-3235 Trifolium pratense
Tp57577_TGAC_v2_gene13972 0.5kb downstream 0.5kb downstream 12073 true Tp57577_TGAC_v2_scaf_417: 3236-15308 Trifolium pratense
Tp57577_TGAC_v2_gene13972 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_417: 14809-15308 Trifolium pratense
Tp57577_TGAC_v2_gene13972 1.0kb upstream 1.0kb upstream 12573 true Tp57577_TGAC_v2_scaf_417: 2236-14808 Trifolium pratense
Tp57577_TGAC_v2_gene13972 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_417: 2236-3235 Trifolium pratense
Tp57577_TGAC_v2_gene13972 1.0kb downstream 1.0kb downstream 12573 true Tp57577_TGAC_v2_scaf_417: 3236-15808 Trifolium pratense
Tp57577_TGAC_v2_gene13972 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_417: 14809-15808 Trifolium pratense
Tp57577_TGAC_v2_gene13972 2.0kb upstream 2.0kb upstream 13573 true Tp57577_TGAC_v2_scaf_417: 1236-14808 Trifolium pratense
Tp57577_TGAC_v2_gene13972 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_417: 1236-3235 Trifolium pratense
Tp57577_TGAC_v2_gene13972 2.0kb downstream 2.0kb downstream 13573 true Tp57577_TGAC_v2_scaf_417: 3236-16808 Trifolium pratense
Tp57577_TGAC_v2_gene13972 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_417: 14809-16808 Trifolium pratense
Tp57577_TGAC_v2_gene13972 5.0kb upstream 5.0kb upstream 14808 true Tp57577_TGAC_v2_scaf_417: 1-14808 Trifolium pratense
Tp57577_TGAC_v2_gene13972 5.0kb upstream 5.0kb upstream 3235 false Tp57577_TGAC_v2_scaf_417: 1-3235 Trifolium pratense
Tp57577_TGAC_v2_gene13972 5.0kb downstream 5.0kb downstream 16573 true Tp57577_TGAC_v2_scaf_417: 3236-19808 Trifolium pratense
Tp57577_TGAC_v2_gene13972 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_417: 14809-19808 Trifolium pratense
Tp57577_TGAC_v2_gene13972 10.0kb upstream 10.0kb upstream 14808 true Tp57577_TGAC_v2_scaf_417: 1-14808 Trifolium pratense
Tp57577_TGAC_v2_gene13972 10.0kb upstream 10.0kb upstream 3235 false Tp57577_TGAC_v2_scaf_417: 1-3235 Trifolium pratense
Tp57577_TGAC_v2_gene13972 10.0kb downstream 10.0kb downstream 21573 true Tp57577_TGAC_v2_scaf_417: 3236-24808 Trifolium pratense
Tp57577_TGAC_v2_gene13972 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_417: 14809-24808 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307507 5265 Fabidae View MSA
124072039 5270 Rosid View MSA
123748863 5271 Pentapetalae View MSA
122787018 5272 Eudicot View MSA
122047928 5273 Angiosperm View MSA
121346419 5274 Embryophyte View MSA
123428850 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain