Gene : Tp57577_TGAC_v2_gene28200 T. pratense v2
Defline:  (1 of 7) K10949 - ER lumen protein retaining receptor (KDELR) Genomic Order:  6
Name:  ? Tp57577_TGAC_v2_gene28200 Secondary Identifier:  ? PAC:35959702
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene28200 0.5kb upstream 0.5kb upstream 4851 true Tp57577_TGAC_v2_scaf_881: 40545-45395 Trifolium pratense
Tp57577_TGAC_v2_gene28200 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_881: 44896-45395 Trifolium pratense
Tp57577_TGAC_v2_gene28200 0.5kb downstream 0.5kb downstream 4851 true Tp57577_TGAC_v2_scaf_881: 40045-44895 Trifolium pratense
Tp57577_TGAC_v2_gene28200 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_881: 40045-40544 Trifolium pratense
Tp57577_TGAC_v2_gene28200 1.0kb upstream 1.0kb upstream 5351 true Tp57577_TGAC_v2_scaf_881: 40545-45895 Trifolium pratense
Tp57577_TGAC_v2_gene28200 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_881: 44896-45895 Trifolium pratense
Tp57577_TGAC_v2_gene28200 1.0kb downstream 1.0kb downstream 5351 true Tp57577_TGAC_v2_scaf_881: 39545-44895 Trifolium pratense
Tp57577_TGAC_v2_gene28200 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_881: 39545-40544 Trifolium pratense
Tp57577_TGAC_v2_gene28200 2.0kb upstream 2.0kb upstream 6351 true Tp57577_TGAC_v2_scaf_881: 40545-46895 Trifolium pratense
Tp57577_TGAC_v2_gene28200 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_881: 44896-46895 Trifolium pratense
Tp57577_TGAC_v2_gene28200 2.0kb downstream 2.0kb downstream 6351 true Tp57577_TGAC_v2_scaf_881: 38545-44895 Trifolium pratense
Tp57577_TGAC_v2_gene28200 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_881: 38545-40544 Trifolium pratense
Tp57577_TGAC_v2_gene28200 5.0kb upstream 5.0kb upstream 9351 true Tp57577_TGAC_v2_scaf_881: 40545-49895 Trifolium pratense
Tp57577_TGAC_v2_gene28200 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_881: 44896-49895 Trifolium pratense
Tp57577_TGAC_v2_gene28200 5.0kb downstream 5.0kb downstream 9351 true Tp57577_TGAC_v2_scaf_881: 35545-44895 Trifolium pratense
Tp57577_TGAC_v2_gene28200 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_881: 35545-40544 Trifolium pratense
Tp57577_TGAC_v2_gene28200 10.0kb upstream 10.0kb upstream 14351 true Tp57577_TGAC_v2_scaf_881: 40545-54895 Trifolium pratense
Tp57577_TGAC_v2_gene28200 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_881: 44896-54895 Trifolium pratense
Tp57577_TGAC_v2_gene28200 10.0kb downstream 10.0kb downstream 14351 true Tp57577_TGAC_v2_scaf_881: 30545-44895 Trifolium pratense
Tp57577_TGAC_v2_gene28200 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_881: 30545-40544 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302012 5265 Fabidae View MSA
124064321 5270 Rosid View MSA
123752811 5271 Pentapetalae View MSA
122786359 5272 Eudicot View MSA
122047549 5273 Angiosperm View MSA
121310757 5274 Embryophyte View MSA
123348166 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain