Gene : Tp57577_TGAC_v2_gene28202 T. pratense v2
Defline:  (1 of 2) PTHR31413:SF4 - NINJA-FAMILY PROTEIN AFP1-RELATED Genomic Order:  3
Name:  ? Tp57577_TGAC_v2_gene28202 Secondary Identifier:  ? PAC:35959701
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene28202 0.5kb upstream 0.5kb upstream 3468 true Tp57577_TGAC_v2_scaf_881: 12338-15805 Trifolium pratense
Tp57577_TGAC_v2_gene28202 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_881: 15306-15805 Trifolium pratense
Tp57577_TGAC_v2_gene28202 0.5kb downstream 0.5kb downstream 3468 true Tp57577_TGAC_v2_scaf_881: 11838-15305 Trifolium pratense
Tp57577_TGAC_v2_gene28202 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_881: 11838-12337 Trifolium pratense
Tp57577_TGAC_v2_gene28202 1.0kb upstream 1.0kb upstream 3968 true Tp57577_TGAC_v2_scaf_881: 12338-16305 Trifolium pratense
Tp57577_TGAC_v2_gene28202 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_881: 15306-16305 Trifolium pratense
Tp57577_TGAC_v2_gene28202 1.0kb downstream 1.0kb downstream 3968 true Tp57577_TGAC_v2_scaf_881: 11338-15305 Trifolium pratense
Tp57577_TGAC_v2_gene28202 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_881: 11338-12337 Trifolium pratense
Tp57577_TGAC_v2_gene28202 2.0kb upstream 2.0kb upstream 4968 true Tp57577_TGAC_v2_scaf_881: 12338-17305 Trifolium pratense
Tp57577_TGAC_v2_gene28202 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_881: 15306-17305 Trifolium pratense
Tp57577_TGAC_v2_gene28202 2.0kb downstream 2.0kb downstream 4968 true Tp57577_TGAC_v2_scaf_881: 10338-15305 Trifolium pratense
Tp57577_TGAC_v2_gene28202 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_881: 10338-12337 Trifolium pratense
Tp57577_TGAC_v2_gene28202 5.0kb upstream 5.0kb upstream 7968 true Tp57577_TGAC_v2_scaf_881: 12338-20305 Trifolium pratense
Tp57577_TGAC_v2_gene28202 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_881: 15306-20305 Trifolium pratense
Tp57577_TGAC_v2_gene28202 5.0kb downstream 5.0kb downstream 7968 true Tp57577_TGAC_v2_scaf_881: 7338-15305 Trifolium pratense
Tp57577_TGAC_v2_gene28202 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_881: 7338-12337 Trifolium pratense
Tp57577_TGAC_v2_gene28202 10.0kb upstream 10.0kb upstream 12968 true Tp57577_TGAC_v2_scaf_881: 12338-25305 Trifolium pratense
Tp57577_TGAC_v2_gene28202 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_881: 15306-25305 Trifolium pratense
Tp57577_TGAC_v2_gene28202 10.0kb downstream 10.0kb downstream 12968 true Tp57577_TGAC_v2_scaf_881: 2338-15305 Trifolium pratense
Tp57577_TGAC_v2_gene28202 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_881: 2338-12337 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301661 5265 Fabidae View MSA
124071046 5270 Rosid View MSA
123753389 5271 Pentapetalae View MSA
122792096 5272 Eudicot View MSA
122050177 5273 Angiosperm View MSA
121311781 5274 Embryophyte View MSA
123349031 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain