Gene : Tp57577_TGAC_v2_gene22425 T. pratense v2
Defline:  (1 of 14) PTHR23042//PTHR23042:SF57 - CIRCADIAN PROTEIN CLOCK/ARNT/BMAL/PAS // SUBFAMILY NOT NAMED Genomic Order:  10
Name:  ? Tp57577_TGAC_v2_gene22425 Secondary Identifier:  ? PAC:35961452
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene22425 0.5kb upstream 0.5kb upstream 2769 true Tp57577_TGAC_v2_scaf_682: 89297-92065 Trifolium pratense
Tp57577_TGAC_v2_gene22425 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_682: 91566-92065 Trifolium pratense
Tp57577_TGAC_v2_gene22425 0.5kb downstream 0.5kb downstream 2769 true Tp57577_TGAC_v2_scaf_682: 88797-91565 Trifolium pratense
Tp57577_TGAC_v2_gene22425 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_682: 88797-89296 Trifolium pratense
Tp57577_TGAC_v2_gene22425 1.0kb upstream 1.0kb upstream 3269 true Tp57577_TGAC_v2_scaf_682: 89297-92565 Trifolium pratense
Tp57577_TGAC_v2_gene22425 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_682: 91566-92565 Trifolium pratense
Tp57577_TGAC_v2_gene22425 1.0kb downstream 1.0kb downstream 3269 true Tp57577_TGAC_v2_scaf_682: 88297-91565 Trifolium pratense
Tp57577_TGAC_v2_gene22425 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_682: 88297-89296 Trifolium pratense
Tp57577_TGAC_v2_gene22425 2.0kb upstream 2.0kb upstream 4269 true Tp57577_TGAC_v2_scaf_682: 89297-93565 Trifolium pratense
Tp57577_TGAC_v2_gene22425 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_682: 91566-93565 Trifolium pratense
Tp57577_TGAC_v2_gene22425 2.0kb downstream 2.0kb downstream 4269 true Tp57577_TGAC_v2_scaf_682: 87297-91565 Trifolium pratense
Tp57577_TGAC_v2_gene22425 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_682: 87297-89296 Trifolium pratense
Tp57577_TGAC_v2_gene22425 5.0kb upstream 5.0kb upstream 7269 true Tp57577_TGAC_v2_scaf_682: 89297-96565 Trifolium pratense
Tp57577_TGAC_v2_gene22425 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_682: 91566-96565 Trifolium pratense
Tp57577_TGAC_v2_gene22425 5.0kb downstream 5.0kb downstream 7269 true Tp57577_TGAC_v2_scaf_682: 84297-91565 Trifolium pratense
Tp57577_TGAC_v2_gene22425 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_682: 84297-89296 Trifolium pratense
Tp57577_TGAC_v2_gene22425 10.0kb upstream 10.0kb upstream 12269 true Tp57577_TGAC_v2_scaf_682: 89297-101565 Trifolium pratense
Tp57577_TGAC_v2_gene22425 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_682: 91566-101565 Trifolium pratense
Tp57577_TGAC_v2_gene22425 10.0kb downstream 10.0kb downstream 12269 true Tp57577_TGAC_v2_scaf_682: 79297-91565 Trifolium pratense
Tp57577_TGAC_v2_gene22425 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_682: 79297-89296 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313043 5265 Fabidae View MSA
124070459 5270 Rosid View MSA
123749435 5271 Pentapetalae View MSA
122795103 5272 Eudicot View MSA
122042005 5273 Angiosperm View MSA
121351451 5274 Embryophyte View MSA
123428440 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain