Gene : Tp57577_TGAC_v2_gene16813 T. pratense v2
Defline:  (1 of 509) PF13041 - PPR repeat family (PPR_2) Genomic Order:  12
Name:  ? Tp57577_TGAC_v2_gene16813 Secondary Identifier:  ? PAC:35962672
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene16813 0.5kb upstream 0.5kb upstream 3028 true Tp57577_TGAC_v2_scaf_255: 119656-122683 Trifolium pratense
Tp57577_TGAC_v2_gene16813 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_255: 119656-120155 Trifolium pratense
Tp57577_TGAC_v2_gene16813 0.5kb downstream 0.5kb downstream 3028 true Tp57577_TGAC_v2_scaf_255: 120156-123183 Trifolium pratense
Tp57577_TGAC_v2_gene16813 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_255: 122684-123183 Trifolium pratense
Tp57577_TGAC_v2_gene16813 1.0kb upstream 1.0kb upstream 3528 true Tp57577_TGAC_v2_scaf_255: 119156-122683 Trifolium pratense
Tp57577_TGAC_v2_gene16813 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_255: 119156-120155 Trifolium pratense
Tp57577_TGAC_v2_gene16813 1.0kb downstream 1.0kb downstream 3528 true Tp57577_TGAC_v2_scaf_255: 120156-123683 Trifolium pratense
Tp57577_TGAC_v2_gene16813 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_255: 122684-123683 Trifolium pratense
Tp57577_TGAC_v2_gene16813 2.0kb upstream 2.0kb upstream 4528 true Tp57577_TGAC_v2_scaf_255: 118156-122683 Trifolium pratense
Tp57577_TGAC_v2_gene16813 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_255: 118156-120155 Trifolium pratense
Tp57577_TGAC_v2_gene16813 2.0kb downstream 2.0kb downstream 4528 true Tp57577_TGAC_v2_scaf_255: 120156-124683 Trifolium pratense
Tp57577_TGAC_v2_gene16813 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_255: 122684-124683 Trifolium pratense
Tp57577_TGAC_v2_gene16813 5.0kb upstream 5.0kb upstream 7528 true Tp57577_TGAC_v2_scaf_255: 115156-122683 Trifolium pratense
Tp57577_TGAC_v2_gene16813 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_255: 115156-120155 Trifolium pratense
Tp57577_TGAC_v2_gene16813 5.0kb downstream 5.0kb downstream 7528 true Tp57577_TGAC_v2_scaf_255: 120156-127683 Trifolium pratense
Tp57577_TGAC_v2_gene16813 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_255: 122684-127683 Trifolium pratense
Tp57577_TGAC_v2_gene16813 10.0kb upstream 10.0kb upstream 12528 true Tp57577_TGAC_v2_scaf_255: 110156-122683 Trifolium pratense
Tp57577_TGAC_v2_gene16813 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_255: 110156-120155 Trifolium pratense
Tp57577_TGAC_v2_gene16813 10.0kb downstream 10.0kb downstream 12528 true Tp57577_TGAC_v2_scaf_255: 120156-132683 Trifolium pratense
Tp57577_TGAC_v2_gene16813 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_255: 122684-132683 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301425 5265 Fabidae View MSA
124072588 5270 Rosid View MSA
123753756 5271 Pentapetalae View MSA
122797794 5272 Eudicot View MSA
122051419 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351195 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain