Gene : Tp57577_TGAC_v2_gene16804 T. pratense v2
Defline:  (1 of 2) PTHR10666//PTHR10666:SF138 - UBIQUITIN // SUBFAMILY NOT NAMED Genomic Order:  22
Name:  ? Tp57577_TGAC_v2_gene16804 Secondary Identifier:  ? PAC:35962675
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-6351 Trifolium pratense pathologic  
Tpratense PWY-6352 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene16804 0.5kb upstream 0.5kb upstream 4249 true Tp57577_TGAC_v2_scaf_255: 215667-219915 Trifolium pratense
Tp57577_TGAC_v2_gene16804 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_255: 219416-219915 Trifolium pratense
Tp57577_TGAC_v2_gene16804 0.5kb downstream 0.5kb downstream 4249 true Tp57577_TGAC_v2_scaf_255: 215167-219415 Trifolium pratense
Tp57577_TGAC_v2_gene16804 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_255: 215167-215666 Trifolium pratense
Tp57577_TGAC_v2_gene16804 1.0kb upstream 1.0kb upstream 4749 true Tp57577_TGAC_v2_scaf_255: 215667-220415 Trifolium pratense
Tp57577_TGAC_v2_gene16804 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_255: 219416-220415 Trifolium pratense
Tp57577_TGAC_v2_gene16804 1.0kb downstream 1.0kb downstream 4749 true Tp57577_TGAC_v2_scaf_255: 214667-219415 Trifolium pratense
Tp57577_TGAC_v2_gene16804 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_255: 214667-215666 Trifolium pratense
Tp57577_TGAC_v2_gene16804 2.0kb upstream 2.0kb upstream 5749 true Tp57577_TGAC_v2_scaf_255: 215667-221415 Trifolium pratense
Tp57577_TGAC_v2_gene16804 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_255: 219416-221415 Trifolium pratense
Tp57577_TGAC_v2_gene16804 2.0kb downstream 2.0kb downstream 5749 true Tp57577_TGAC_v2_scaf_255: 213667-219415 Trifolium pratense
Tp57577_TGAC_v2_gene16804 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_255: 213667-215666 Trifolium pratense
Tp57577_TGAC_v2_gene16804 5.0kb upstream 5.0kb upstream 8749 true Tp57577_TGAC_v2_scaf_255: 215667-224415 Trifolium pratense
Tp57577_TGAC_v2_gene16804 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_255: 219416-224415 Trifolium pratense
Tp57577_TGAC_v2_gene16804 5.0kb downstream 5.0kb downstream 8749 true Tp57577_TGAC_v2_scaf_255: 210667-219415 Trifolium pratense
Tp57577_TGAC_v2_gene16804 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_255: 210667-215666 Trifolium pratense
Tp57577_TGAC_v2_gene16804 10.0kb upstream 10.0kb upstream 13749 true Tp57577_TGAC_v2_scaf_255: 215667-229415 Trifolium pratense
Tp57577_TGAC_v2_gene16804 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_255: 219416-229415 Trifolium pratense
Tp57577_TGAC_v2_gene16804 10.0kb downstream 10.0kb downstream 13749 true Tp57577_TGAC_v2_scaf_255: 205667-219415 Trifolium pratense
Tp57577_TGAC_v2_gene16804 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_255: 205667-215666 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313355 5265 Fabidae View MSA
124070925 5270 Rosid View MSA
123742266 5271 Pentapetalae View MSA
122789753 5272 Eudicot View MSA
122042633 5273 Angiosperm View MSA
121350148 5274 Embryophyte View MSA
123381595 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain