Gene : Tp57577_TGAC_v2_gene35019 T. pratense v2
Defline:  (1 of 39) PF05553 - Cotton fibre expressed protein (DUF761) Genomic Order:  3
Name:  ? Tp57577_TGAC_v2_gene35019 Secondary Identifier:  ? PAC:35962390
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene35019 0.5kb upstream 0.5kb upstream 1517 true Tp57577_TGAC_v2_scaf_673: 9249-10765 Trifolium pratense
Tp57577_TGAC_v2_gene35019 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_673: 10266-10765 Trifolium pratense
Tp57577_TGAC_v2_gene35019 0.5kb downstream 0.5kb downstream 1517 true Tp57577_TGAC_v2_scaf_673: 8749-10265 Trifolium pratense
Tp57577_TGAC_v2_gene35019 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_673: 8749-9248 Trifolium pratense
Tp57577_TGAC_v2_gene35019 1.0kb upstream 1.0kb upstream 2017 true Tp57577_TGAC_v2_scaf_673: 9249-11265 Trifolium pratense
Tp57577_TGAC_v2_gene35019 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_673: 10266-11265 Trifolium pratense
Tp57577_TGAC_v2_gene35019 1.0kb downstream 1.0kb downstream 2017 true Tp57577_TGAC_v2_scaf_673: 8249-10265 Trifolium pratense
Tp57577_TGAC_v2_gene35019 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_673: 8249-9248 Trifolium pratense
Tp57577_TGAC_v2_gene35019 2.0kb upstream 2.0kb upstream 3017 true Tp57577_TGAC_v2_scaf_673: 9249-12265 Trifolium pratense
Tp57577_TGAC_v2_gene35019 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_673: 10266-12265 Trifolium pratense
Tp57577_TGAC_v2_gene35019 2.0kb downstream 2.0kb downstream 3017 true Tp57577_TGAC_v2_scaf_673: 7249-10265 Trifolium pratense
Tp57577_TGAC_v2_gene35019 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_673: 7249-9248 Trifolium pratense
Tp57577_TGAC_v2_gene35019 5.0kb upstream 5.0kb upstream 6017 true Tp57577_TGAC_v2_scaf_673: 9249-15265 Trifolium pratense
Tp57577_TGAC_v2_gene35019 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_673: 10266-15265 Trifolium pratense
Tp57577_TGAC_v2_gene35019 5.0kb downstream 5.0kb downstream 6017 true Tp57577_TGAC_v2_scaf_673: 4249-10265 Trifolium pratense
Tp57577_TGAC_v2_gene35019 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_673: 4249-9248 Trifolium pratense
Tp57577_TGAC_v2_gene35019 10.0kb upstream 10.0kb upstream 11017 true Tp57577_TGAC_v2_scaf_673: 9249-20265 Trifolium pratense
Tp57577_TGAC_v2_gene35019 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_673: 10266-20265 Trifolium pratense
Tp57577_TGAC_v2_gene35019 10.0kb downstream 10.0kb downstream 10265 true Tp57577_TGAC_v2_scaf_673: 1-10265 Trifolium pratense
Tp57577_TGAC_v2_gene35019 10.0kb downstream 10.0kb downstream 9248 false Tp57577_TGAC_v2_scaf_673: 1-9248 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313783 5265 Fabidae View MSA
124070746 5270 Rosid View MSA
123749628 5271 Pentapetalae View MSA
122795982 5272 Eudicot View MSA
122049050 5273 Angiosperm View MSA
121311224 5274 Embryophyte View MSA
123348548 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain