Gene : Tp57577_TGAC_v2_gene25711 T. pratense v2
Defline:  (1 of 8) PF05703//PF08458 - Auxin canalisation (Auxin_canalis) // Plant pleckstrin homology-like region (PH_2) Genomic Order:  8
Name:  ? Tp57577_TGAC_v2_gene25711 Secondary Identifier:  ? PAC:35953014
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene25711 0.5kb upstream 0.5kb upstream 5677 true Tp57577_TGAC_v2_scaf_169: 50689-56365 Trifolium pratense
Tp57577_TGAC_v2_gene25711 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_169: 55866-56365 Trifolium pratense
Tp57577_TGAC_v2_gene25711 0.5kb downstream 0.5kb downstream 5677 true Tp57577_TGAC_v2_scaf_169: 50189-55865 Trifolium pratense
Tp57577_TGAC_v2_gene25711 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_169: 50189-50688 Trifolium pratense
Tp57577_TGAC_v2_gene25711 1.0kb upstream 1.0kb upstream 6177 true Tp57577_TGAC_v2_scaf_169: 50689-56865 Trifolium pratense
Tp57577_TGAC_v2_gene25711 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_169: 55866-56865 Trifolium pratense
Tp57577_TGAC_v2_gene25711 1.0kb downstream 1.0kb downstream 6177 true Tp57577_TGAC_v2_scaf_169: 49689-55865 Trifolium pratense
Tp57577_TGAC_v2_gene25711 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_169: 49689-50688 Trifolium pratense
Tp57577_TGAC_v2_gene25711 2.0kb upstream 2.0kb upstream 7177 true Tp57577_TGAC_v2_scaf_169: 50689-57865 Trifolium pratense
Tp57577_TGAC_v2_gene25711 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_169: 55866-57865 Trifolium pratense
Tp57577_TGAC_v2_gene25711 2.0kb downstream 2.0kb downstream 7177 true Tp57577_TGAC_v2_scaf_169: 48689-55865 Trifolium pratense
Tp57577_TGAC_v2_gene25711 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_169: 48689-50688 Trifolium pratense
Tp57577_TGAC_v2_gene25711 5.0kb upstream 5.0kb upstream 10177 true Tp57577_TGAC_v2_scaf_169: 50689-60865 Trifolium pratense
Tp57577_TGAC_v2_gene25711 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_169: 55866-60865 Trifolium pratense
Tp57577_TGAC_v2_gene25711 5.0kb downstream 5.0kb downstream 10177 true Tp57577_TGAC_v2_scaf_169: 45689-55865 Trifolium pratense
Tp57577_TGAC_v2_gene25711 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_169: 45689-50688 Trifolium pratense
Tp57577_TGAC_v2_gene25711 10.0kb upstream 10.0kb upstream 15177 true Tp57577_TGAC_v2_scaf_169: 50689-65865 Trifolium pratense
Tp57577_TGAC_v2_gene25711 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_169: 55866-65865 Trifolium pratense
Tp57577_TGAC_v2_gene25711 10.0kb downstream 10.0kb downstream 15177 true Tp57577_TGAC_v2_scaf_169: 40689-55865 Trifolium pratense
Tp57577_TGAC_v2_gene25711 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_169: 40689-50688 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307435 5265 Fabidae View MSA
124061946 5270 Rosid View MSA
123746535 5271 Pentapetalae View MSA
122785782 5272 Eudicot View MSA
122047623 5273 Angiosperm View MSA
121348921 5274 Embryophyte View MSA
123381080 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain