Gene : Tp57577_TGAC_v2_gene21258 T. pratense v2
Defline:  (1 of 1) PTHR31692:SF4 - EXPANSIN-LIKE A1-RELATED Genomic Order:  16
Name:  ? Tp57577_TGAC_v2_gene21258 Secondary Identifier:  ? PAC:35976759
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene21258 0.5kb upstream 0.5kb upstream 2826 true Tp57577_TGAC_v2_scaf_378: 213560-216385 Trifolium pratense
Tp57577_TGAC_v2_gene21258 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_378: 215886-216385 Trifolium pratense
Tp57577_TGAC_v2_gene21258 0.5kb downstream 0.5kb downstream 2826 true Tp57577_TGAC_v2_scaf_378: 213060-215885 Trifolium pratense
Tp57577_TGAC_v2_gene21258 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_378: 213060-213559 Trifolium pratense
Tp57577_TGAC_v2_gene21258 1.0kb upstream 1.0kb upstream 3326 true Tp57577_TGAC_v2_scaf_378: 213560-216885 Trifolium pratense
Tp57577_TGAC_v2_gene21258 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_378: 215886-216885 Trifolium pratense
Tp57577_TGAC_v2_gene21258 1.0kb downstream 1.0kb downstream 3326 true Tp57577_TGAC_v2_scaf_378: 212560-215885 Trifolium pratense
Tp57577_TGAC_v2_gene21258 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_378: 212560-213559 Trifolium pratense
Tp57577_TGAC_v2_gene21258 2.0kb upstream 2.0kb upstream 4326 true Tp57577_TGAC_v2_scaf_378: 213560-217885 Trifolium pratense
Tp57577_TGAC_v2_gene21258 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_378: 215886-217885 Trifolium pratense
Tp57577_TGAC_v2_gene21258 2.0kb downstream 2.0kb downstream 4326 true Tp57577_TGAC_v2_scaf_378: 211560-215885 Trifolium pratense
Tp57577_TGAC_v2_gene21258 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_378: 211560-213559 Trifolium pratense
Tp57577_TGAC_v2_gene21258 5.0kb upstream 5.0kb upstream 7326 true Tp57577_TGAC_v2_scaf_378: 213560-220885 Trifolium pratense
Tp57577_TGAC_v2_gene21258 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_378: 215886-220885 Trifolium pratense
Tp57577_TGAC_v2_gene21258 5.0kb downstream 5.0kb downstream 7326 true Tp57577_TGAC_v2_scaf_378: 208560-215885 Trifolium pratense
Tp57577_TGAC_v2_gene21258 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_378: 208560-213559 Trifolium pratense
Tp57577_TGAC_v2_gene21258 10.0kb upstream 10.0kb upstream 12326 true Tp57577_TGAC_v2_scaf_378: 213560-225885 Trifolium pratense
Tp57577_TGAC_v2_gene21258 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_378: 215886-225885 Trifolium pratense
Tp57577_TGAC_v2_gene21258 10.0kb downstream 10.0kb downstream 12326 true Tp57577_TGAC_v2_scaf_378: 203560-215885 Trifolium pratense
Tp57577_TGAC_v2_gene21258 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_378: 203560-213559 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299918 5265 Fabidae View MSA
124063116 5270 Rosid View MSA
123739587 5271 Pentapetalae View MSA
122785615 5272 Eudicot View MSA
122042929 5273 Angiosperm View MSA
121310045 5274 Embryophyte View MSA
123347644 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain