Gene : Tp57577_TGAC_v2_gene14966 T. pratense v2
Defline:  (1 of 2) K03681 - exosome complex component RRP40 (RRP40, EXOSC3) Genomic Order:  6
Name:  ? Tp57577_TGAC_v2_gene14966 Secondary Identifier:  ? PAC:35961897
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene14966 0.5kb upstream 0.5kb upstream 5658 true Tp57577_TGAC_v2_scaf_591: 36048-41705 Trifolium pratense
Tp57577_TGAC_v2_gene14966 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_591: 41206-41705 Trifolium pratense
Tp57577_TGAC_v2_gene14966 0.5kb downstream 0.5kb downstream 5658 true Tp57577_TGAC_v2_scaf_591: 35548-41205 Trifolium pratense
Tp57577_TGAC_v2_gene14966 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_591: 35548-36047 Trifolium pratense
Tp57577_TGAC_v2_gene14966 1.0kb upstream 1.0kb upstream 6158 true Tp57577_TGAC_v2_scaf_591: 36048-42205 Trifolium pratense
Tp57577_TGAC_v2_gene14966 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_591: 41206-42205 Trifolium pratense
Tp57577_TGAC_v2_gene14966 1.0kb downstream 1.0kb downstream 6158 true Tp57577_TGAC_v2_scaf_591: 35048-41205 Trifolium pratense
Tp57577_TGAC_v2_gene14966 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_591: 35048-36047 Trifolium pratense
Tp57577_TGAC_v2_gene14966 2.0kb upstream 2.0kb upstream 7158 true Tp57577_TGAC_v2_scaf_591: 36048-43205 Trifolium pratense
Tp57577_TGAC_v2_gene14966 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_591: 41206-43205 Trifolium pratense
Tp57577_TGAC_v2_gene14966 2.0kb downstream 2.0kb downstream 7158 true Tp57577_TGAC_v2_scaf_591: 34048-41205 Trifolium pratense
Tp57577_TGAC_v2_gene14966 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_591: 34048-36047 Trifolium pratense
Tp57577_TGAC_v2_gene14966 5.0kb upstream 5.0kb upstream 10158 true Tp57577_TGAC_v2_scaf_591: 36048-46205 Trifolium pratense
Tp57577_TGAC_v2_gene14966 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_591: 41206-46205 Trifolium pratense
Tp57577_TGAC_v2_gene14966 5.0kb downstream 5.0kb downstream 10158 true Tp57577_TGAC_v2_scaf_591: 31048-41205 Trifolium pratense
Tp57577_TGAC_v2_gene14966 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_591: 31048-36047 Trifolium pratense
Tp57577_TGAC_v2_gene14966 10.0kb upstream 10.0kb upstream 15158 true Tp57577_TGAC_v2_scaf_591: 36048-51205 Trifolium pratense
Tp57577_TGAC_v2_gene14966 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_591: 41206-51205 Trifolium pratense
Tp57577_TGAC_v2_gene14966 10.0kb downstream 10.0kb downstream 15158 true Tp57577_TGAC_v2_scaf_591: 26048-41205 Trifolium pratense
Tp57577_TGAC_v2_gene14966 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_591: 26048-36047 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301974 5265 Fabidae View MSA
124061201 5270 Rosid View MSA
123736741 5271 Pentapetalae View MSA
122789639 5272 Eudicot View MSA
122045630 5273 Angiosperm View MSA
121344862 5274 Embryophyte View MSA
123428759 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain