Gene : Tp57577_TGAC_v2_gene10334 T. pratense v2
Defline:  (1 of 1) PF03879 - Cgr1 family (Cgr1) Genomic Order:  8
Name:  ? Tp57577_TGAC_v2_gene10334 Secondary Identifier:  ? PAC:35954153
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene10334 0.5kb upstream 0.5kb upstream 1463 true Tp57577_TGAC_v2_scaf_565: 54003-55465 Trifolium pratense
Tp57577_TGAC_v2_gene10334 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_565: 54966-55465 Trifolium pratense
Tp57577_TGAC_v2_gene10334 0.5kb downstream 0.5kb downstream 1463 true Tp57577_TGAC_v2_scaf_565: 53503-54965 Trifolium pratense
Tp57577_TGAC_v2_gene10334 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_565: 53503-54002 Trifolium pratense
Tp57577_TGAC_v2_gene10334 1.0kb upstream 1.0kb upstream 1963 true Tp57577_TGAC_v2_scaf_565: 54003-55965 Trifolium pratense
Tp57577_TGAC_v2_gene10334 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_565: 54966-55965 Trifolium pratense
Tp57577_TGAC_v2_gene10334 1.0kb downstream 1.0kb downstream 1963 true Tp57577_TGAC_v2_scaf_565: 53003-54965 Trifolium pratense
Tp57577_TGAC_v2_gene10334 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_565: 53003-54002 Trifolium pratense
Tp57577_TGAC_v2_gene10334 2.0kb upstream 2.0kb upstream 2963 true Tp57577_TGAC_v2_scaf_565: 54003-56965 Trifolium pratense
Tp57577_TGAC_v2_gene10334 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_565: 54966-56965 Trifolium pratense
Tp57577_TGAC_v2_gene10334 2.0kb downstream 2.0kb downstream 2963 true Tp57577_TGAC_v2_scaf_565: 52003-54965 Trifolium pratense
Tp57577_TGAC_v2_gene10334 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_565: 52003-54002 Trifolium pratense
Tp57577_TGAC_v2_gene10334 5.0kb upstream 5.0kb upstream 5963 true Tp57577_TGAC_v2_scaf_565: 54003-59965 Trifolium pratense
Tp57577_TGAC_v2_gene10334 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_565: 54966-59965 Trifolium pratense
Tp57577_TGAC_v2_gene10334 5.0kb downstream 5.0kb downstream 5963 true Tp57577_TGAC_v2_scaf_565: 49003-54965 Trifolium pratense
Tp57577_TGAC_v2_gene10334 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_565: 49003-54002 Trifolium pratense
Tp57577_TGAC_v2_gene10334 10.0kb upstream 10.0kb upstream 10963 true Tp57577_TGAC_v2_scaf_565: 54003-64965 Trifolium pratense
Tp57577_TGAC_v2_gene10334 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_565: 54966-64965 Trifolium pratense
Tp57577_TGAC_v2_gene10334 10.0kb downstream 10.0kb downstream 10963 true Tp57577_TGAC_v2_scaf_565: 44003-54965 Trifolium pratense
Tp57577_TGAC_v2_gene10334 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_565: 44003-54002 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307427 5265 Fabidae View MSA
124066001 5270 Rosid View MSA
123746651 5271 Pentapetalae View MSA
122786473 5272 Eudicot View MSA
122044383 5273 Angiosperm View MSA
121348750 5274 Embryophyte View MSA
123426387 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain