Gene : Tp57577_TGAC_v2_gene10339 T. pratense v2
Defline:  (1 of 1) KOG2164 - Predicted E3 ubiquitin ligase Genomic Order:  2
Name:  ? Tp57577_TGAC_v2_gene10339 Secondary Identifier:  ? PAC:35954148
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene10339 0.5kb upstream 0.5kb upstream 6966 true Tp57577_TGAC_v2_scaf_565: 24550-31515 Trifolium pratense
Tp57577_TGAC_v2_gene10339 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_565: 24550-25049 Trifolium pratense
Tp57577_TGAC_v2_gene10339 0.5kb downstream 0.5kb downstream 6966 true Tp57577_TGAC_v2_scaf_565: 25050-32015 Trifolium pratense
Tp57577_TGAC_v2_gene10339 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_565: 31516-32015 Trifolium pratense
Tp57577_TGAC_v2_gene10339 1.0kb upstream 1.0kb upstream 7466 true Tp57577_TGAC_v2_scaf_565: 24050-31515 Trifolium pratense
Tp57577_TGAC_v2_gene10339 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_565: 24050-25049 Trifolium pratense
Tp57577_TGAC_v2_gene10339 1.0kb downstream 1.0kb downstream 7466 true Tp57577_TGAC_v2_scaf_565: 25050-32515 Trifolium pratense
Tp57577_TGAC_v2_gene10339 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_565: 31516-32515 Trifolium pratense
Tp57577_TGAC_v2_gene10339 2.0kb upstream 2.0kb upstream 8466 true Tp57577_TGAC_v2_scaf_565: 23050-31515 Trifolium pratense
Tp57577_TGAC_v2_gene10339 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_565: 23050-25049 Trifolium pratense
Tp57577_TGAC_v2_gene10339 2.0kb downstream 2.0kb downstream 8466 true Tp57577_TGAC_v2_scaf_565: 25050-33515 Trifolium pratense
Tp57577_TGAC_v2_gene10339 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_565: 31516-33515 Trifolium pratense
Tp57577_TGAC_v2_gene10339 5.0kb upstream 5.0kb upstream 11466 true Tp57577_TGAC_v2_scaf_565: 20050-31515 Trifolium pratense
Tp57577_TGAC_v2_gene10339 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_565: 20050-25049 Trifolium pratense
Tp57577_TGAC_v2_gene10339 5.0kb downstream 5.0kb downstream 11466 true Tp57577_TGAC_v2_scaf_565: 25050-36515 Trifolium pratense
Tp57577_TGAC_v2_gene10339 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_565: 31516-36515 Trifolium pratense
Tp57577_TGAC_v2_gene10339 10.0kb upstream 10.0kb upstream 16466 true Tp57577_TGAC_v2_scaf_565: 15050-31515 Trifolium pratense
Tp57577_TGAC_v2_gene10339 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_565: 15050-25049 Trifolium pratense
Tp57577_TGAC_v2_gene10339 10.0kb downstream 10.0kb downstream 16466 true Tp57577_TGAC_v2_scaf_565: 25050-41515 Trifolium pratense
Tp57577_TGAC_v2_gene10339 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_565: 31516-41515 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306700 5265 Fabidae View MSA
124060786 5270 Rosid View MSA
123742061 5271 Pentapetalae View MSA
122793495 5272 Eudicot View MSA
122042542 5273 Angiosperm View MSA
121344560 5274 Embryophyte View MSA
123423758 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain