Gene : Tp57577_TGAC_v2_gene10485 T. pratense v2
Defline:  (1 of 1) PTHR31807:SF6 - PROTEIN ENDOSPERM DEFECTIVE 1-RELATED Genomic Order:  26
Name:  ? Tp57577_TGAC_v2_gene10485 Secondary Identifier:  ? PAC:35968952
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene10485 0.5kb upstream 0.5kb upstream 4658 true Tp57577_TGAC_v2_scaf_217: 243658-248315 Trifolium pratense
Tp57577_TGAC_v2_gene10485 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_217: 247816-248315 Trifolium pratense
Tp57577_TGAC_v2_gene10485 0.5kb downstream 0.5kb downstream 4658 true Tp57577_TGAC_v2_scaf_217: 243158-247815 Trifolium pratense
Tp57577_TGAC_v2_gene10485 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_217: 243158-243657 Trifolium pratense
Tp57577_TGAC_v2_gene10485 1.0kb upstream 1.0kb upstream 5158 true Tp57577_TGAC_v2_scaf_217: 243658-248815 Trifolium pratense
Tp57577_TGAC_v2_gene10485 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_217: 247816-248815 Trifolium pratense
Tp57577_TGAC_v2_gene10485 1.0kb downstream 1.0kb downstream 5158 true Tp57577_TGAC_v2_scaf_217: 242658-247815 Trifolium pratense
Tp57577_TGAC_v2_gene10485 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_217: 242658-243657 Trifolium pratense
Tp57577_TGAC_v2_gene10485 2.0kb upstream 2.0kb upstream 6158 true Tp57577_TGAC_v2_scaf_217: 243658-249815 Trifolium pratense
Tp57577_TGAC_v2_gene10485 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_217: 247816-249815 Trifolium pratense
Tp57577_TGAC_v2_gene10485 2.0kb downstream 2.0kb downstream 6158 true Tp57577_TGAC_v2_scaf_217: 241658-247815 Trifolium pratense
Tp57577_TGAC_v2_gene10485 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_217: 241658-243657 Trifolium pratense
Tp57577_TGAC_v2_gene10485 5.0kb upstream 5.0kb upstream 9158 true Tp57577_TGAC_v2_scaf_217: 243658-252815 Trifolium pratense
Tp57577_TGAC_v2_gene10485 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_217: 247816-252815 Trifolium pratense
Tp57577_TGAC_v2_gene10485 5.0kb downstream 5.0kb downstream 9158 true Tp57577_TGAC_v2_scaf_217: 238658-247815 Trifolium pratense
Tp57577_TGAC_v2_gene10485 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_217: 238658-243657 Trifolium pratense
Tp57577_TGAC_v2_gene10485 10.0kb upstream 10.0kb upstream 14158 true Tp57577_TGAC_v2_scaf_217: 243658-257815 Trifolium pratense
Tp57577_TGAC_v2_gene10485 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_217: 247816-257815 Trifolium pratense
Tp57577_TGAC_v2_gene10485 10.0kb downstream 10.0kb downstream 14158 true Tp57577_TGAC_v2_scaf_217: 233658-247815 Trifolium pratense
Tp57577_TGAC_v2_gene10485 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_217: 233658-243657 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309438 5265 Fabidae View MSA
124067070 5270 Rosid View MSA
123752575 5271 Pentapetalae View MSA
122788375 5272 Eudicot View MSA
122044458 5273 Angiosperm View MSA
121348675 5274 Embryophyte View MSA
123426167 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain