Gene : Tp57577_TGAC_v2_gene10499 T. pratense v2
Defline:  (1 of 36) PF03000 - NPH3 family (NPH3) Genomic Order:  3
Name:  ? Tp57577_TGAC_v2_gene10499 Secondary Identifier:  ? PAC:35968966
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene10499 0.5kb upstream 0.5kb upstream 6348 true Tp57577_TGAC_v2_scaf_217: 10636-16983 Trifolium pratense
Tp57577_TGAC_v2_gene10499 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_217: 10636-11135 Trifolium pratense
Tp57577_TGAC_v2_gene10499 0.5kb downstream 0.5kb downstream 6348 true Tp57577_TGAC_v2_scaf_217: 11136-17483 Trifolium pratense
Tp57577_TGAC_v2_gene10499 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_217: 16984-17483 Trifolium pratense
Tp57577_TGAC_v2_gene10499 1.0kb upstream 1.0kb upstream 6848 true Tp57577_TGAC_v2_scaf_217: 10136-16983 Trifolium pratense
Tp57577_TGAC_v2_gene10499 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_217: 10136-11135 Trifolium pratense
Tp57577_TGAC_v2_gene10499 1.0kb downstream 1.0kb downstream 6848 true Tp57577_TGAC_v2_scaf_217: 11136-17983 Trifolium pratense
Tp57577_TGAC_v2_gene10499 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_217: 16984-17983 Trifolium pratense
Tp57577_TGAC_v2_gene10499 2.0kb upstream 2.0kb upstream 7848 true Tp57577_TGAC_v2_scaf_217: 9136-16983 Trifolium pratense
Tp57577_TGAC_v2_gene10499 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_217: 9136-11135 Trifolium pratense
Tp57577_TGAC_v2_gene10499 2.0kb downstream 2.0kb downstream 7848 true Tp57577_TGAC_v2_scaf_217: 11136-18983 Trifolium pratense
Tp57577_TGAC_v2_gene10499 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_217: 16984-18983 Trifolium pratense
Tp57577_TGAC_v2_gene10499 5.0kb upstream 5.0kb upstream 10848 true Tp57577_TGAC_v2_scaf_217: 6136-16983 Trifolium pratense
Tp57577_TGAC_v2_gene10499 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_217: 6136-11135 Trifolium pratense
Tp57577_TGAC_v2_gene10499 5.0kb downstream 5.0kb downstream 10848 true Tp57577_TGAC_v2_scaf_217: 11136-21983 Trifolium pratense
Tp57577_TGAC_v2_gene10499 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_217: 16984-21983 Trifolium pratense
Tp57577_TGAC_v2_gene10499 10.0kb upstream 10.0kb upstream 15848 true Tp57577_TGAC_v2_scaf_217: 1136-16983 Trifolium pratense
Tp57577_TGAC_v2_gene10499 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_217: 1136-11135 Trifolium pratense
Tp57577_TGAC_v2_gene10499 10.0kb downstream 10.0kb downstream 15848 true Tp57577_TGAC_v2_scaf_217: 11136-26983 Trifolium pratense
Tp57577_TGAC_v2_gene10499 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_217: 16984-26983 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026454 5273 Angiosperm View MSA
122313072 5265 Fabidae View MSA
124067148 5270 Rosid View MSA
123737998 5271 Pentapetalae View MSA
122789015 5272 Eudicot View MSA
121296339 5274 Embryophyte View MSA
123334520 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain