Gene : Tp57577_TGAC_v2_gene29084 T. pratense v2
Defline:  (1 of 6) PF03007//PF06974 - Wax ester synthase-like Acyl-CoA acyltransferase domain (WES_acyltransf) // Protein of unknown function (DUF1298) (DUF1298) Genomic Order:  1
Name:  ? Tp57577_TGAC_v2_gene29084 Secondary Identifier:  ? PAC:35962198
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene29084 0.5kb upstream 0.5kb upstream 2797 true Tp57577_TGAC_v2_scaf_823: 1078-3874 Trifolium pratense
Tp57577_TGAC_v2_gene29084 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_823: 3375-3874 Trifolium pratense
Tp57577_TGAC_v2_gene29084 0.5kb downstream 0.5kb downstream 2797 true Tp57577_TGAC_v2_scaf_823: 578-3374 Trifolium pratense
Tp57577_TGAC_v2_gene29084 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_823: 578-1077 Trifolium pratense
Tp57577_TGAC_v2_gene29084 1.0kb upstream 1.0kb upstream 3297 true Tp57577_TGAC_v2_scaf_823: 1078-4374 Trifolium pratense
Tp57577_TGAC_v2_gene29084 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_823: 3375-4374 Trifolium pratense
Tp57577_TGAC_v2_gene29084 1.0kb downstream 1.0kb downstream 3297 true Tp57577_TGAC_v2_scaf_823: 78-3374 Trifolium pratense
Tp57577_TGAC_v2_gene29084 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_823: 78-1077 Trifolium pratense
Tp57577_TGAC_v2_gene29084 2.0kb upstream 2.0kb upstream 4297 true Tp57577_TGAC_v2_scaf_823: 1078-5374 Trifolium pratense
Tp57577_TGAC_v2_gene29084 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_823: 3375-5374 Trifolium pratense
Tp57577_TGAC_v2_gene29084 2.0kb downstream 2.0kb downstream 3374 true Tp57577_TGAC_v2_scaf_823: 1-3374 Trifolium pratense
Tp57577_TGAC_v2_gene29084 2.0kb downstream 2.0kb downstream 1077 false Tp57577_TGAC_v2_scaf_823: 1-1077 Trifolium pratense
Tp57577_TGAC_v2_gene29084 5.0kb upstream 5.0kb upstream 7297 true Tp57577_TGAC_v2_scaf_823: 1078-8374 Trifolium pratense
Tp57577_TGAC_v2_gene29084 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_823: 3375-8374 Trifolium pratense
Tp57577_TGAC_v2_gene29084 5.0kb downstream 5.0kb downstream 3374 true Tp57577_TGAC_v2_scaf_823: 1-3374 Trifolium pratense
Tp57577_TGAC_v2_gene29084 5.0kb downstream 5.0kb downstream 1077 false Tp57577_TGAC_v2_scaf_823: 1-1077 Trifolium pratense
Tp57577_TGAC_v2_gene29084 10.0kb upstream 10.0kb upstream 12297 true Tp57577_TGAC_v2_scaf_823: 1078-13374 Trifolium pratense
Tp57577_TGAC_v2_gene29084 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_823: 3375-13374 Trifolium pratense
Tp57577_TGAC_v2_gene29084 10.0kb downstream 10.0kb downstream 3374 true Tp57577_TGAC_v2_scaf_823: 1-3374 Trifolium pratense
Tp57577_TGAC_v2_gene29084 10.0kb downstream 10.0kb downstream 1077 false Tp57577_TGAC_v2_scaf_823: 1-1077 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313899 5265 Fabidae View MSA
124072323 5270 Rosid View MSA
123749190 5271 Pentapetalae View MSA
122797420 5272 Eudicot View MSA
122048260 5273 Angiosperm View MSA
123428993 5275 Viridiplantae View MSA
121310908 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain