Gene : Tp57577_TGAC_v2_gene34467 T. pratense v2
Defline:  (1 of 1) PTHR15238:SF3 - 50S RIBOSOMAL PROTEIN L33, CHLOROPLASTIC Genomic Order:  5
Name:  ? Tp57577_TGAC_v2_gene34467 Secondary Identifier:  ? PAC:35982663
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene34467 0.5kb upstream 0.5kb upstream 1523 true Tp57577_TGAC_v2_scaf_609: 37446-38968 Trifolium pratense
Tp57577_TGAC_v2_gene34467 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_609: 37446-37945 Trifolium pratense
Tp57577_TGAC_v2_gene34467 0.5kb downstream 0.5kb downstream 1523 true Tp57577_TGAC_v2_scaf_609: 37946-39468 Trifolium pratense
Tp57577_TGAC_v2_gene34467 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_609: 38969-39468 Trifolium pratense
Tp57577_TGAC_v2_gene34467 1.0kb upstream 1.0kb upstream 2023 true Tp57577_TGAC_v2_scaf_609: 36946-38968 Trifolium pratense
Tp57577_TGAC_v2_gene34467 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_609: 36946-37945 Trifolium pratense
Tp57577_TGAC_v2_gene34467 1.0kb downstream 1.0kb downstream 2023 true Tp57577_TGAC_v2_scaf_609: 37946-39968 Trifolium pratense
Tp57577_TGAC_v2_gene34467 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_609: 38969-39968 Trifolium pratense
Tp57577_TGAC_v2_gene34467 2.0kb upstream 2.0kb upstream 3023 true Tp57577_TGAC_v2_scaf_609: 35946-38968 Trifolium pratense
Tp57577_TGAC_v2_gene34467 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_609: 35946-37945 Trifolium pratense
Tp57577_TGAC_v2_gene34467 2.0kb downstream 2.0kb downstream 3023 true Tp57577_TGAC_v2_scaf_609: 37946-40968 Trifolium pratense
Tp57577_TGAC_v2_gene34467 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_609: 38969-40968 Trifolium pratense
Tp57577_TGAC_v2_gene34467 5.0kb upstream 5.0kb upstream 6023 true Tp57577_TGAC_v2_scaf_609: 32946-38968 Trifolium pratense
Tp57577_TGAC_v2_gene34467 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_609: 32946-37945 Trifolium pratense
Tp57577_TGAC_v2_gene34467 5.0kb downstream 5.0kb downstream 6023 true Tp57577_TGAC_v2_scaf_609: 37946-43968 Trifolium pratense
Tp57577_TGAC_v2_gene34467 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_609: 38969-43968 Trifolium pratense
Tp57577_TGAC_v2_gene34467 10.0kb upstream 10.0kb upstream 11023 true Tp57577_TGAC_v2_scaf_609: 27946-38968 Trifolium pratense
Tp57577_TGAC_v2_gene34467 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_609: 27946-37945 Trifolium pratense
Tp57577_TGAC_v2_gene34467 10.0kb downstream 10.0kb downstream 11023 true Tp57577_TGAC_v2_scaf_609: 37946-48968 Trifolium pratense
Tp57577_TGAC_v2_gene34467 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_609: 38969-48968 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121779911 5273 Angiosperm View MSA
122288157 5265 Fabidae View MSA
124040356 5270 Rosid View MSA
123744482 5271 Pentapetalae View MSA
122771105 5272 Eudicot View MSA
121051547 5274 Embryophyte View MSA
123091633 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain