Gene : Tp57577_TGAC_v2_gene40270 T. pratense v2
Defline:  (1 of 12) KOG1546 - Metacaspase involved in regulation of apoptosis Genomic Order:  4
Name:  ? Tp57577_TGAC_v2_gene40270 Secondary Identifier:  ? PAC:35955009
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene40270 0.5kb upstream 0.5kb upstream 2857 true Tp57577_TGAC_v2_scaf_1464: 14636-17492 Trifolium pratense
Tp57577_TGAC_v2_gene40270 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_1464: 14636-15135 Trifolium pratense
Tp57577_TGAC_v2_gene40270 0.5kb downstream 0.5kb downstream 2857 true Tp57577_TGAC_v2_scaf_1464: 15136-17992 Trifolium pratense
Tp57577_TGAC_v2_gene40270 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_1464: 17493-17992 Trifolium pratense
Tp57577_TGAC_v2_gene40270 1.0kb upstream 1.0kb upstream 3357 true Tp57577_TGAC_v2_scaf_1464: 14136-17492 Trifolium pratense
Tp57577_TGAC_v2_gene40270 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_1464: 14136-15135 Trifolium pratense
Tp57577_TGAC_v2_gene40270 1.0kb downstream 1.0kb downstream 3357 true Tp57577_TGAC_v2_scaf_1464: 15136-18492 Trifolium pratense
Tp57577_TGAC_v2_gene40270 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_1464: 17493-18492 Trifolium pratense
Tp57577_TGAC_v2_gene40270 2.0kb upstream 2.0kb upstream 4357 true Tp57577_TGAC_v2_scaf_1464: 13136-17492 Trifolium pratense
Tp57577_TGAC_v2_gene40270 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_1464: 13136-15135 Trifolium pratense
Tp57577_TGAC_v2_gene40270 2.0kb downstream 2.0kb downstream 4357 true Tp57577_TGAC_v2_scaf_1464: 15136-19492 Trifolium pratense
Tp57577_TGAC_v2_gene40270 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_1464: 17493-19492 Trifolium pratense
Tp57577_TGAC_v2_gene40270 5.0kb upstream 5.0kb upstream 7357 true Tp57577_TGAC_v2_scaf_1464: 10136-17492 Trifolium pratense
Tp57577_TGAC_v2_gene40270 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_1464: 10136-15135 Trifolium pratense
Tp57577_TGAC_v2_gene40270 5.0kb downstream 5.0kb downstream 7357 true Tp57577_TGAC_v2_scaf_1464: 15136-22492 Trifolium pratense
Tp57577_TGAC_v2_gene40270 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_1464: 17493-22492 Trifolium pratense
Tp57577_TGAC_v2_gene40270 10.0kb upstream 10.0kb upstream 12357 true Tp57577_TGAC_v2_scaf_1464: 5136-17492 Trifolium pratense
Tp57577_TGAC_v2_gene40270 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_1464: 5136-15135 Trifolium pratense
Tp57577_TGAC_v2_gene40270 10.0kb downstream 10.0kb downstream 7544 true Tp57577_TGAC_v2_scaf_1464: 15136-22679 Trifolium pratense
Tp57577_TGAC_v2_gene40270 10.0kb downstream 10.0kb downstream 5187 false Tp57577_TGAC_v2_scaf_1464: 17493-22679 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297835 5265 Fabidae View MSA
124037273 5270 Rosid View MSA
123744103 5271 Pentapetalae View MSA
122795793 5272 Eudicot View MSA
122050099 5273 Angiosperm View MSA
123428899 5275 Viridiplantae View MSA
121348125 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain