Gene : Tp57577_TGAC_v2_gene22440 T. pratense v2
Defline:  (1 of 1) PTHR10836:SF59 - GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE GAPC1, CYTOSOLIC Genomic Order:  10
Name:  ? Tp57577_TGAC_v2_gene22440 Secondary Identifier:  ? PAC:35992552
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense ANAEROFRUCAT-PWY Trifolium pratense pathologic  
Tpratense ANAGLYCOLYSIS-PWY Trifolium pratense pathologic  
Tpratense GLUCONEO-PWY Trifolium pratense pathologic  
Tpratense PWY-1042 Trifolium pratense pathologic  
Tpratense PWY-5464 Trifolium pratense pathologic  
Tpratense SUCSYN-PWY Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene22440 0.5kb upstream 0.5kb upstream 3023 true Tp57577_TGAC_v2_scaf_681: 86853-89875 Trifolium pratense
Tp57577_TGAC_v2_gene22440 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_681: 89376-89875 Trifolium pratense
Tp57577_TGAC_v2_gene22440 0.5kb downstream 0.5kb downstream 3023 true Tp57577_TGAC_v2_scaf_681: 86353-89375 Trifolium pratense
Tp57577_TGAC_v2_gene22440 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_681: 86353-86852 Trifolium pratense
Tp57577_TGAC_v2_gene22440 1.0kb upstream 1.0kb upstream 3523 true Tp57577_TGAC_v2_scaf_681: 86853-90375 Trifolium pratense
Tp57577_TGAC_v2_gene22440 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_681: 89376-90375 Trifolium pratense
Tp57577_TGAC_v2_gene22440 1.0kb downstream 1.0kb downstream 3523 true Tp57577_TGAC_v2_scaf_681: 85853-89375 Trifolium pratense
Tp57577_TGAC_v2_gene22440 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_681: 85853-86852 Trifolium pratense
Tp57577_TGAC_v2_gene22440 2.0kb upstream 2.0kb upstream 4523 true Tp57577_TGAC_v2_scaf_681: 86853-91375 Trifolium pratense
Tp57577_TGAC_v2_gene22440 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_681: 89376-91375 Trifolium pratense
Tp57577_TGAC_v2_gene22440 2.0kb downstream 2.0kb downstream 4523 true Tp57577_TGAC_v2_scaf_681: 84853-89375 Trifolium pratense
Tp57577_TGAC_v2_gene22440 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_681: 84853-86852 Trifolium pratense
Tp57577_TGAC_v2_gene22440 5.0kb upstream 5.0kb upstream 7523 true Tp57577_TGAC_v2_scaf_681: 86853-94375 Trifolium pratense
Tp57577_TGAC_v2_gene22440 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_681: 89376-94375 Trifolium pratense
Tp57577_TGAC_v2_gene22440 5.0kb downstream 5.0kb downstream 7523 true Tp57577_TGAC_v2_scaf_681: 81853-89375 Trifolium pratense
Tp57577_TGAC_v2_gene22440 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_681: 81853-86852 Trifolium pratense
Tp57577_TGAC_v2_gene22440 10.0kb upstream 10.0kb upstream 12523 true Tp57577_TGAC_v2_scaf_681: 86853-99375 Trifolium pratense
Tp57577_TGAC_v2_gene22440 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_681: 89376-99375 Trifolium pratense
Tp57577_TGAC_v2_gene22440 10.0kb downstream 10.0kb downstream 12523 true Tp57577_TGAC_v2_scaf_681: 76853-89375 Trifolium pratense
Tp57577_TGAC_v2_gene22440 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_681: 76853-86852 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314378 5265 Fabidae View MSA
124074393 5270 Rosid View MSA
123750297 5271 Pentapetalae View MSA
122795499 5272 Eudicot View MSA
122051601 5273 Angiosperm View MSA
121347451 5274 Embryophyte View MSA
123425180 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain