Gene : Tp57577_TGAC_v2_gene36517 T. pratense v2
Defline:  (1 of 1) PTHR12741:SF9 - CALLOSE SYNTHASE 1-RELATED Genomic Order:  1
Name:  ? Tp57577_TGAC_v2_gene36517 Secondary Identifier:  ? PAC:35991925
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-6773 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene36517 0.5kb upstream 0.5kb upstream 18798 true Tp57577_TGAC_v2_scaf_1417: 886-19683 Trifolium pratense
Tp57577_TGAC_v2_gene36517 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_1417: 886-1385 Trifolium pratense
Tp57577_TGAC_v2_gene36517 0.5kb downstream 0.5kb downstream 18798 true Tp57577_TGAC_v2_scaf_1417: 1386-20183 Trifolium pratense
Tp57577_TGAC_v2_gene36517 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_1417: 19684-20183 Trifolium pratense
Tp57577_TGAC_v2_gene36517 1.0kb upstream 1.0kb upstream 19298 true Tp57577_TGAC_v2_scaf_1417: 386-19683 Trifolium pratense
Tp57577_TGAC_v2_gene36517 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_1417: 386-1385 Trifolium pratense
Tp57577_TGAC_v2_gene36517 1.0kb downstream 1.0kb downstream 19298 true Tp57577_TGAC_v2_scaf_1417: 1386-20683 Trifolium pratense
Tp57577_TGAC_v2_gene36517 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_1417: 19684-20683 Trifolium pratense
Tp57577_TGAC_v2_gene36517 2.0kb upstream 2.0kb upstream 19683 true Tp57577_TGAC_v2_scaf_1417: 1-19683 Trifolium pratense
Tp57577_TGAC_v2_gene36517 2.0kb upstream 2.0kb upstream 1385 false Tp57577_TGAC_v2_scaf_1417: 1-1385 Trifolium pratense
Tp57577_TGAC_v2_gene36517 2.0kb downstream 2.0kb downstream 20298 true Tp57577_TGAC_v2_scaf_1417: 1386-21683 Trifolium pratense
Tp57577_TGAC_v2_gene36517 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_1417: 19684-21683 Trifolium pratense
Tp57577_TGAC_v2_gene36517 5.0kb upstream 5.0kb upstream 19683 true Tp57577_TGAC_v2_scaf_1417: 1-19683 Trifolium pratense
Tp57577_TGAC_v2_gene36517 5.0kb upstream 5.0kb upstream 1385 false Tp57577_TGAC_v2_scaf_1417: 1-1385 Trifolium pratense
Tp57577_TGAC_v2_gene36517 5.0kb downstream 5.0kb downstream 23298 true Tp57577_TGAC_v2_scaf_1417: 1386-24683 Trifolium pratense
Tp57577_TGAC_v2_gene36517 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_1417: 19684-24683 Trifolium pratense
Tp57577_TGAC_v2_gene36517 10.0kb upstream 10.0kb upstream 19683 true Tp57577_TGAC_v2_scaf_1417: 1-19683 Trifolium pratense
Tp57577_TGAC_v2_gene36517 10.0kb upstream 10.0kb upstream 1385 false Tp57577_TGAC_v2_scaf_1417: 1-1385 Trifolium pratense
Tp57577_TGAC_v2_gene36517 10.0kb downstream 10.0kb downstream 24372 true Tp57577_TGAC_v2_scaf_1417: 1386-25757 Trifolium pratense
Tp57577_TGAC_v2_gene36517 10.0kb downstream 10.0kb downstream 6074 false Tp57577_TGAC_v2_scaf_1417: 19684-25757 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122296508 5265 Fabidae View MSA
124072639 5270 Rosid View MSA
123745171 5271 Pentapetalae View MSA
122788947 5272 Eudicot View MSA
122050431 5273 Angiosperm View MSA
121349066 5274 Embryophyte View MSA
123428420 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain