Gene : Tp57577_TGAC_v2_gene21204 T. pratense v2
Defline:  (1 of 36) PF03000 - NPH3 family (NPH3) Genomic Order:  2
Name:  ? Tp57577_TGAC_v2_gene21204 Secondary Identifier:  ? PAC:35969511
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene21204 0.5kb upstream 0.5kb upstream 2801 true Tp57577_TGAC_v2_scaf_380: 16085-18885 Trifolium pratense
Tp57577_TGAC_v2_gene21204 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_380: 18386-18885 Trifolium pratense
Tp57577_TGAC_v2_gene21204 0.5kb downstream 0.5kb downstream 2801 true Tp57577_TGAC_v2_scaf_380: 15585-18385 Trifolium pratense
Tp57577_TGAC_v2_gene21204 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_380: 15585-16084 Trifolium pratense
Tp57577_TGAC_v2_gene21204 1.0kb upstream 1.0kb upstream 3301 true Tp57577_TGAC_v2_scaf_380: 16085-19385 Trifolium pratense
Tp57577_TGAC_v2_gene21204 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_380: 18386-19385 Trifolium pratense
Tp57577_TGAC_v2_gene21204 1.0kb downstream 1.0kb downstream 3301 true Tp57577_TGAC_v2_scaf_380: 15085-18385 Trifolium pratense
Tp57577_TGAC_v2_gene21204 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_380: 15085-16084 Trifolium pratense
Tp57577_TGAC_v2_gene21204 2.0kb upstream 2.0kb upstream 4301 true Tp57577_TGAC_v2_scaf_380: 16085-20385 Trifolium pratense
Tp57577_TGAC_v2_gene21204 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_380: 18386-20385 Trifolium pratense
Tp57577_TGAC_v2_gene21204 2.0kb downstream 2.0kb downstream 4301 true Tp57577_TGAC_v2_scaf_380: 14085-18385 Trifolium pratense
Tp57577_TGAC_v2_gene21204 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_380: 14085-16084 Trifolium pratense
Tp57577_TGAC_v2_gene21204 5.0kb upstream 5.0kb upstream 7301 true Tp57577_TGAC_v2_scaf_380: 16085-23385 Trifolium pratense
Tp57577_TGAC_v2_gene21204 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_380: 18386-23385 Trifolium pratense
Tp57577_TGAC_v2_gene21204 5.0kb downstream 5.0kb downstream 7301 true Tp57577_TGAC_v2_scaf_380: 11085-18385 Trifolium pratense
Tp57577_TGAC_v2_gene21204 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_380: 11085-16084 Trifolium pratense
Tp57577_TGAC_v2_gene21204 10.0kb upstream 10.0kb upstream 12301 true Tp57577_TGAC_v2_scaf_380: 16085-28385 Trifolium pratense
Tp57577_TGAC_v2_gene21204 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_380: 18386-28385 Trifolium pratense
Tp57577_TGAC_v2_gene21204 10.0kb downstream 10.0kb downstream 12301 true Tp57577_TGAC_v2_scaf_380: 6085-18385 Trifolium pratense
Tp57577_TGAC_v2_gene21204 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_380: 6085-16084 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297641 5265 Fabidae View MSA
124036097 5270 Rosid View MSA
123743168 5271 Pentapetalae View MSA
122791271 5272 Eudicot View MSA
122050644 5273 Angiosperm View MSA
121312043 5274 Embryophyte View MSA
123349254 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain