Gene : Tp57577_TGAC_v2_gene28951 T. pratense v2
Defline:  (1 of 15) PF10358 - N-terminal C2 in EEIG1 and EHBP1 proteins (NT-C2) Genomic Order:  6
Name:  ? Tp57577_TGAC_v2_gene28951 Secondary Identifier:  ? PAC:35987070
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene28951 0.5kb upstream 0.5kb upstream 12445 true Tp57577_TGAC_v2_scaf_832: 42419-54863 Trifolium pratense
Tp57577_TGAC_v2_gene28951 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_832: 42419-42918 Trifolium pratense
Tp57577_TGAC_v2_gene28951 0.5kb downstream 0.5kb downstream 12445 true Tp57577_TGAC_v2_scaf_832: 42919-55363 Trifolium pratense
Tp57577_TGAC_v2_gene28951 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_832: 54864-55363 Trifolium pratense
Tp57577_TGAC_v2_gene28951 1.0kb upstream 1.0kb upstream 12945 true Tp57577_TGAC_v2_scaf_832: 41919-54863 Trifolium pratense
Tp57577_TGAC_v2_gene28951 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_832: 41919-42918 Trifolium pratense
Tp57577_TGAC_v2_gene28951 1.0kb downstream 1.0kb downstream 12945 true Tp57577_TGAC_v2_scaf_832: 42919-55863 Trifolium pratense
Tp57577_TGAC_v2_gene28951 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_832: 54864-55863 Trifolium pratense
Tp57577_TGAC_v2_gene28951 2.0kb upstream 2.0kb upstream 13945 true Tp57577_TGAC_v2_scaf_832: 40919-54863 Trifolium pratense
Tp57577_TGAC_v2_gene28951 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_832: 40919-42918 Trifolium pratense
Tp57577_TGAC_v2_gene28951 2.0kb downstream 2.0kb downstream 13945 true Tp57577_TGAC_v2_scaf_832: 42919-56863 Trifolium pratense
Tp57577_TGAC_v2_gene28951 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_832: 54864-56863 Trifolium pratense
Tp57577_TGAC_v2_gene28951 5.0kb upstream 5.0kb upstream 16945 true Tp57577_TGAC_v2_scaf_832: 37919-54863 Trifolium pratense
Tp57577_TGAC_v2_gene28951 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_832: 37919-42918 Trifolium pratense
Tp57577_TGAC_v2_gene28951 5.0kb downstream 5.0kb downstream 16945 true Tp57577_TGAC_v2_scaf_832: 42919-59863 Trifolium pratense
Tp57577_TGAC_v2_gene28951 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_832: 54864-59863 Trifolium pratense
Tp57577_TGAC_v2_gene28951 10.0kb upstream 10.0kb upstream 21945 true Tp57577_TGAC_v2_scaf_832: 32919-54863 Trifolium pratense
Tp57577_TGAC_v2_gene28951 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_832: 32919-42918 Trifolium pratense
Tp57577_TGAC_v2_gene28951 10.0kb downstream 10.0kb downstream 21945 true Tp57577_TGAC_v2_scaf_832: 42919-64863 Trifolium pratense
Tp57577_TGAC_v2_gene28951 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_832: 54864-64863 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311061 5265 Fabidae View MSA
124073951 5270 Rosid View MSA
123751263 5271 Pentapetalae View MSA
122794773 5272 Eudicot View MSA
122048313 5273 Angiosperm View MSA
121348283 5274 Embryophyte View MSA
123428094 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain