Gene : Tp57577_TGAC_v2_gene34514 T. pratense v2
Defline:  (1 of 12) KOG1546 - Metacaspase involved in regulation of apoptosis Genomic Order:  4
Name:  ? Tp57577_TGAC_v2_gene34514 Secondary Identifier:  ? PAC:35982159
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene34514 0.5kb upstream 0.5kb upstream 2949 true Tp57577_TGAC_v2_scaf_616: 17897-20845 Trifolium pratense
Tp57577_TGAC_v2_gene34514 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_616: 20346-20845 Trifolium pratense
Tp57577_TGAC_v2_gene34514 0.5kb downstream 0.5kb downstream 2949 true Tp57577_TGAC_v2_scaf_616: 17397-20345 Trifolium pratense
Tp57577_TGAC_v2_gene34514 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_616: 17397-17896 Trifolium pratense
Tp57577_TGAC_v2_gene34514 1.0kb upstream 1.0kb upstream 3449 true Tp57577_TGAC_v2_scaf_616: 17897-21345 Trifolium pratense
Tp57577_TGAC_v2_gene34514 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_616: 20346-21345 Trifolium pratense
Tp57577_TGAC_v2_gene34514 1.0kb downstream 1.0kb downstream 3449 true Tp57577_TGAC_v2_scaf_616: 16897-20345 Trifolium pratense
Tp57577_TGAC_v2_gene34514 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_616: 16897-17896 Trifolium pratense
Tp57577_TGAC_v2_gene34514 2.0kb upstream 2.0kb upstream 4449 true Tp57577_TGAC_v2_scaf_616: 17897-22345 Trifolium pratense
Tp57577_TGAC_v2_gene34514 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_616: 20346-22345 Trifolium pratense
Tp57577_TGAC_v2_gene34514 2.0kb downstream 2.0kb downstream 4449 true Tp57577_TGAC_v2_scaf_616: 15897-20345 Trifolium pratense
Tp57577_TGAC_v2_gene34514 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_616: 15897-17896 Trifolium pratense
Tp57577_TGAC_v2_gene34514 5.0kb upstream 5.0kb upstream 7449 true Tp57577_TGAC_v2_scaf_616: 17897-25345 Trifolium pratense
Tp57577_TGAC_v2_gene34514 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_616: 20346-25345 Trifolium pratense
Tp57577_TGAC_v2_gene34514 5.0kb downstream 5.0kb downstream 7449 true Tp57577_TGAC_v2_scaf_616: 12897-20345 Trifolium pratense
Tp57577_TGAC_v2_gene34514 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_616: 12897-17896 Trifolium pratense
Tp57577_TGAC_v2_gene34514 10.0kb upstream 10.0kb upstream 12449 true Tp57577_TGAC_v2_scaf_616: 17897-30345 Trifolium pratense
Tp57577_TGAC_v2_gene34514 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_616: 20346-30345 Trifolium pratense
Tp57577_TGAC_v2_gene34514 10.0kb downstream 10.0kb downstream 12449 true Tp57577_TGAC_v2_scaf_616: 7897-20345 Trifolium pratense
Tp57577_TGAC_v2_gene34514 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_616: 7897-17896 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027947 5273 Angiosperm View MSA
122311960 5265 Fabidae View MSA
124070963 5270 Rosid View MSA
123753362 5271 Pentapetalae View MSA
122775074 5272 Eudicot View MSA
123428899 5275 Viridiplantae View MSA
121350269 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain