Gene : Tp57577_TGAC_v2_gene779 T. pratense v2
Defline:  (1 of 2) K11352 - NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 12 (NDUFA12) Genomic Order:  2
Name:  ? Tp57577_TGAC_v2_gene779 Secondary Identifier:  ? PAC:35953512
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-3781 Trifolium pratense pathologic  
Tpratense PWY-4302 Trifolium pratense pathologic  
Tpratense PWY-5083 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene779 0.5kb upstream 0.5kb upstream 4009 true Tp57577_TGAC_v2_scaf_2277: 1926-5934 Trifolium pratense
Tp57577_TGAC_v2_gene779 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_2277: 5435-5934 Trifolium pratense
Tp57577_TGAC_v2_gene779 0.5kb downstream 0.5kb downstream 4009 true Tp57577_TGAC_v2_scaf_2277: 1426-5434 Trifolium pratense
Tp57577_TGAC_v2_gene779 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_2277: 1426-1925 Trifolium pratense
Tp57577_TGAC_v2_gene779 1.0kb upstream 1.0kb upstream 4509 true Tp57577_TGAC_v2_scaf_2277: 1926-6434 Trifolium pratense
Tp57577_TGAC_v2_gene779 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_2277: 5435-6434 Trifolium pratense
Tp57577_TGAC_v2_gene779 1.0kb downstream 1.0kb downstream 4509 true Tp57577_TGAC_v2_scaf_2277: 926-5434 Trifolium pratense
Tp57577_TGAC_v2_gene779 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_2277: 926-1925 Trifolium pratense
Tp57577_TGAC_v2_gene779 2.0kb upstream 2.0kb upstream 4922 true Tp57577_TGAC_v2_scaf_2277: 1926-6847 Trifolium pratense
Tp57577_TGAC_v2_gene779 2.0kb upstream 2.0kb upstream 1413 false Tp57577_TGAC_v2_scaf_2277: 5435-6847 Trifolium pratense
Tp57577_TGAC_v2_gene779 2.0kb downstream 2.0kb downstream 5434 true Tp57577_TGAC_v2_scaf_2277: 1-5434 Trifolium pratense
Tp57577_TGAC_v2_gene779 2.0kb downstream 2.0kb downstream 1925 false Tp57577_TGAC_v2_scaf_2277: 1-1925 Trifolium pratense
Tp57577_TGAC_v2_gene779 5.0kb upstream 5.0kb upstream 4922 true Tp57577_TGAC_v2_scaf_2277: 1926-6847 Trifolium pratense
Tp57577_TGAC_v2_gene779 5.0kb upstream 5.0kb upstream 1413 false Tp57577_TGAC_v2_scaf_2277: 5435-6847 Trifolium pratense
Tp57577_TGAC_v2_gene779 5.0kb downstream 5.0kb downstream 5434 true Tp57577_TGAC_v2_scaf_2277: 1-5434 Trifolium pratense
Tp57577_TGAC_v2_gene779 5.0kb downstream 5.0kb downstream 1925 false Tp57577_TGAC_v2_scaf_2277: 1-1925 Trifolium pratense
Tp57577_TGAC_v2_gene779 10.0kb upstream 10.0kb upstream 4922 true Tp57577_TGAC_v2_scaf_2277: 1926-6847 Trifolium pratense
Tp57577_TGAC_v2_gene779 10.0kb upstream 10.0kb upstream 1413 false Tp57577_TGAC_v2_scaf_2277: 5435-6847 Trifolium pratense
Tp57577_TGAC_v2_gene779 10.0kb downstream 10.0kb downstream 5434 true Tp57577_TGAC_v2_scaf_2277: 1-5434 Trifolium pratense
Tp57577_TGAC_v2_gene779 10.0kb downstream 10.0kb downstream 1925 false Tp57577_TGAC_v2_scaf_2277: 1-1925 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302976 5265 Fabidae View MSA
124065378 5270 Rosid View MSA
123737211 5271 Pentapetalae View MSA
122787293 5272 Eudicot View MSA
122043638 5273 Angiosperm View MSA
121345011 5274 Embryophyte View MSA
123426349 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain