Gene : Tp57577_TGAC_v2_gene16539 T. pratense v2
Defline:  (1 of 2) K02979 - small subunit ribosomal protein S28e (RP-S28e, RPS28) Genomic Order:  8
Name:  ? Tp57577_TGAC_v2_gene16539 Secondary Identifier:  ? PAC:35962113
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene16539 0.5kb upstream 0.5kb upstream 1873 true Tp57577_TGAC_v2_scaf_265: 42336-44208 Trifolium pratense
Tp57577_TGAC_v2_gene16539 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_265: 42336-42835 Trifolium pratense
Tp57577_TGAC_v2_gene16539 0.5kb downstream 0.5kb downstream 1873 true Tp57577_TGAC_v2_scaf_265: 42836-44708 Trifolium pratense
Tp57577_TGAC_v2_gene16539 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_265: 44209-44708 Trifolium pratense
Tp57577_TGAC_v2_gene16539 1.0kb upstream 1.0kb upstream 2373 true Tp57577_TGAC_v2_scaf_265: 41836-44208 Trifolium pratense
Tp57577_TGAC_v2_gene16539 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_265: 41836-42835 Trifolium pratense
Tp57577_TGAC_v2_gene16539 1.0kb downstream 1.0kb downstream 2373 true Tp57577_TGAC_v2_scaf_265: 42836-45208 Trifolium pratense
Tp57577_TGAC_v2_gene16539 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_265: 44209-45208 Trifolium pratense
Tp57577_TGAC_v2_gene16539 2.0kb upstream 2.0kb upstream 3373 true Tp57577_TGAC_v2_scaf_265: 40836-44208 Trifolium pratense
Tp57577_TGAC_v2_gene16539 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_265: 40836-42835 Trifolium pratense
Tp57577_TGAC_v2_gene16539 2.0kb downstream 2.0kb downstream 3373 true Tp57577_TGAC_v2_scaf_265: 42836-46208 Trifolium pratense
Tp57577_TGAC_v2_gene16539 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_265: 44209-46208 Trifolium pratense
Tp57577_TGAC_v2_gene16539 5.0kb upstream 5.0kb upstream 6373 true Tp57577_TGAC_v2_scaf_265: 37836-44208 Trifolium pratense
Tp57577_TGAC_v2_gene16539 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_265: 37836-42835 Trifolium pratense
Tp57577_TGAC_v2_gene16539 5.0kb downstream 5.0kb downstream 6373 true Tp57577_TGAC_v2_scaf_265: 42836-49208 Trifolium pratense
Tp57577_TGAC_v2_gene16539 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_265: 44209-49208 Trifolium pratense
Tp57577_TGAC_v2_gene16539 10.0kb upstream 10.0kb upstream 11373 true Tp57577_TGAC_v2_scaf_265: 32836-44208 Trifolium pratense
Tp57577_TGAC_v2_gene16539 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_265: 32836-42835 Trifolium pratense
Tp57577_TGAC_v2_gene16539 10.0kb downstream 10.0kb downstream 11373 true Tp57577_TGAC_v2_scaf_265: 42836-54208 Trifolium pratense
Tp57577_TGAC_v2_gene16539 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_265: 44209-54208 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026233 5273 Angiosperm View MSA
122311163 5265 Fabidae View MSA
124062378 5270 Rosid View MSA
123752334 5271 Pentapetalae View MSA
122796938 5272 Eudicot View MSA
121351383 5274 Embryophyte View MSA
123425094 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain