Gene : Tp57577_TGAC_v2_gene855 T. pratense v2
Defline:  (1 of 2) PTHR10992:SF742 - ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN Genomic Order:  1
Name:  ? Tp57577_TGAC_v2_gene855 Secondary Identifier:  ? PAC:35986015
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense LIPAS-PWY Trifolium pratense pathologic  
Tpratense PWY-7420 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene855 0.5kb upstream 0.5kb upstream 3257 true Tp57577_TGAC_v2_scaf_2247: 1602-4858 Trifolium pratense
Tp57577_TGAC_v2_gene855 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_2247: 1602-2101 Trifolium pratense
Tp57577_TGAC_v2_gene855 0.5kb downstream 0.5kb downstream 3257 true Tp57577_TGAC_v2_scaf_2247: 2102-5358 Trifolium pratense
Tp57577_TGAC_v2_gene855 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_2247: 4859-5358 Trifolium pratense
Tp57577_TGAC_v2_gene855 1.0kb upstream 1.0kb upstream 3757 true Tp57577_TGAC_v2_scaf_2247: 1102-4858 Trifolium pratense
Tp57577_TGAC_v2_gene855 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_2247: 1102-2101 Trifolium pratense
Tp57577_TGAC_v2_gene855 1.0kb downstream 1.0kb downstream 3757 true Tp57577_TGAC_v2_scaf_2247: 2102-5858 Trifolium pratense
Tp57577_TGAC_v2_gene855 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_2247: 4859-5858 Trifolium pratense
Tp57577_TGAC_v2_gene855 2.0kb upstream 2.0kb upstream 4757 true Tp57577_TGAC_v2_scaf_2247: 102-4858 Trifolium pratense
Tp57577_TGAC_v2_gene855 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_2247: 102-2101 Trifolium pratense
Tp57577_TGAC_v2_gene855 2.0kb downstream 2.0kb downstream 4757 true Tp57577_TGAC_v2_scaf_2247: 2102-6858 Trifolium pratense
Tp57577_TGAC_v2_gene855 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_2247: 4859-6858 Trifolium pratense
Tp57577_TGAC_v2_gene855 5.0kb upstream 5.0kb upstream 4858 true Tp57577_TGAC_v2_scaf_2247: 1-4858 Trifolium pratense
Tp57577_TGAC_v2_gene855 5.0kb upstream 5.0kb upstream 2101 false Tp57577_TGAC_v2_scaf_2247: 1-2101 Trifolium pratense
Tp57577_TGAC_v2_gene855 5.0kb downstream 5.0kb downstream 5029 true Tp57577_TGAC_v2_scaf_2247: 2102-7130 Trifolium pratense
Tp57577_TGAC_v2_gene855 5.0kb downstream 5.0kb downstream 2272 false Tp57577_TGAC_v2_scaf_2247: 4859-7130 Trifolium pratense
Tp57577_TGAC_v2_gene855 10.0kb upstream 10.0kb upstream 4858 true Tp57577_TGAC_v2_scaf_2247: 1-4858 Trifolium pratense
Tp57577_TGAC_v2_gene855 10.0kb upstream 10.0kb upstream 2101 false Tp57577_TGAC_v2_scaf_2247: 1-2101 Trifolium pratense
Tp57577_TGAC_v2_gene855 10.0kb downstream 10.0kb downstream 5029 true Tp57577_TGAC_v2_scaf_2247: 2102-7130 Trifolium pratense
Tp57577_TGAC_v2_gene855 10.0kb downstream 10.0kb downstream 2272 false Tp57577_TGAC_v2_scaf_2247: 4859-7130 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304383 5265 Fabidae View MSA
124063278 5270 Rosid View MSA
123749753 5271 Pentapetalae View MSA
122790165 5272 Eudicot View MSA
122050369 5273 Angiosperm View MSA
123428977 5275 Viridiplantae View MSA
121351643 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain