Gene : Tp57577_TGAC_v2_gene26044 T. pratense v2
Defline:  (1 of 1) PTHR11451//PTHR11451:SF6 - TRNA SYNTHETASE-RELATED // SUBFAMILY NOT NAMED Genomic Order:  24
Name:  ? Tp57577_TGAC_v2_gene26044 Secondary Identifier:  ? PAC:35952453
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense TRNA-CHARGING-PWY Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene26044 0.5kb upstream 0.5kb upstream 5914 true Tp57577_TGAC_v2_scaf_152: 167637-173550 Trifolium pratense
Tp57577_TGAC_v2_gene26044 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_152: 167637-168136 Trifolium pratense
Tp57577_TGAC_v2_gene26044 0.5kb downstream 0.5kb downstream 5914 true Tp57577_TGAC_v2_scaf_152: 168137-174050 Trifolium pratense
Tp57577_TGAC_v2_gene26044 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_152: 173551-174050 Trifolium pratense
Tp57577_TGAC_v2_gene26044 1.0kb upstream 1.0kb upstream 6414 true Tp57577_TGAC_v2_scaf_152: 167137-173550 Trifolium pratense
Tp57577_TGAC_v2_gene26044 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_152: 167137-168136 Trifolium pratense
Tp57577_TGAC_v2_gene26044 1.0kb downstream 1.0kb downstream 6414 true Tp57577_TGAC_v2_scaf_152: 168137-174550 Trifolium pratense
Tp57577_TGAC_v2_gene26044 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_152: 173551-174550 Trifolium pratense
Tp57577_TGAC_v2_gene26044 2.0kb upstream 2.0kb upstream 7414 true Tp57577_TGAC_v2_scaf_152: 166137-173550 Trifolium pratense
Tp57577_TGAC_v2_gene26044 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_152: 166137-168136 Trifolium pratense
Tp57577_TGAC_v2_gene26044 2.0kb downstream 2.0kb downstream 7414 true Tp57577_TGAC_v2_scaf_152: 168137-175550 Trifolium pratense
Tp57577_TGAC_v2_gene26044 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_152: 173551-175550 Trifolium pratense
Tp57577_TGAC_v2_gene26044 5.0kb upstream 5.0kb upstream 10414 true Tp57577_TGAC_v2_scaf_152: 163137-173550 Trifolium pratense
Tp57577_TGAC_v2_gene26044 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_152: 163137-168136 Trifolium pratense
Tp57577_TGAC_v2_gene26044 5.0kb downstream 5.0kb downstream 10414 true Tp57577_TGAC_v2_scaf_152: 168137-178550 Trifolium pratense
Tp57577_TGAC_v2_gene26044 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_152: 173551-178550 Trifolium pratense
Tp57577_TGAC_v2_gene26044 10.0kb upstream 10.0kb upstream 15414 true Tp57577_TGAC_v2_scaf_152: 158137-173550 Trifolium pratense
Tp57577_TGAC_v2_gene26044 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_152: 158137-168136 Trifolium pratense
Tp57577_TGAC_v2_gene26044 10.0kb downstream 10.0kb downstream 15414 true Tp57577_TGAC_v2_scaf_152: 168137-183550 Trifolium pratense
Tp57577_TGAC_v2_gene26044 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_152: 173551-183550 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308637 5265 Fabidae View MSA
124067863 5270 Rosid View MSA
123737640 5271 Pentapetalae View MSA
122793581 5272 Eudicot View MSA
122044069 5273 Angiosperm View MSA
121345199 5274 Embryophyte View MSA
123428629 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain