Gene : Tp57577_TGAC_v2_gene12594 T. pratense v2
Defline:  (1 of 1) PTHR12103:SF15 - PROTEIN Y71H10B.1, ISOFORM C Genomic Order:  2647
Name:  ? Tp57577_TGAC_v2_gene12594 Secondary Identifier:  ? PAC:35969571
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Sequence Feature Displayer

Ontology Annotation Displayer

7 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-5381 Trifolium pratense pathologic  
Tpratense PWY-5695 Trifolium pratense pathologic  
Tpratense PWY-6606 Trifolium pratense pathologic  
Tpratense PWY-6608 Trifolium pratense pathologic  
Tpratense PWY-7185 Trifolium pratense pathologic  
Tpratense SALVADEHYPOX-PWY Trifolium pratense pathologic  
Tpratense URSIN-PWY Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene12594 0.5kb upstream 0.5kb upstream 9443 true Tp57577_TGAC_v2_LG2: 24617759-24627201 Trifolium pratense
Tp57577_TGAC_v2_gene12594 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG2: 24626702-24627201 Trifolium pratense
Tp57577_TGAC_v2_gene12594 0.5kb downstream 0.5kb downstream 9443 true Tp57577_TGAC_v2_LG2: 24617259-24626701 Trifolium pratense
Tp57577_TGAC_v2_gene12594 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG2: 24617259-24617758 Trifolium pratense
Tp57577_TGAC_v2_gene12594 1.0kb upstream 1.0kb upstream 9943 true Tp57577_TGAC_v2_LG2: 24617759-24627701 Trifolium pratense
Tp57577_TGAC_v2_gene12594 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG2: 24626702-24627701 Trifolium pratense
Tp57577_TGAC_v2_gene12594 1.0kb downstream 1.0kb downstream 9943 true Tp57577_TGAC_v2_LG2: 24616759-24626701 Trifolium pratense
Tp57577_TGAC_v2_gene12594 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG2: 24616759-24617758 Trifolium pratense
Tp57577_TGAC_v2_gene12594 2.0kb upstream 2.0kb upstream 10943 true Tp57577_TGAC_v2_LG2: 24617759-24628701 Trifolium pratense
Tp57577_TGAC_v2_gene12594 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG2: 24626702-24628701 Trifolium pratense
Tp57577_TGAC_v2_gene12594 2.0kb downstream 2.0kb downstream 10943 true Tp57577_TGAC_v2_LG2: 24615759-24626701 Trifolium pratense
Tp57577_TGAC_v2_gene12594 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG2: 24615759-24617758 Trifolium pratense
Tp57577_TGAC_v2_gene12594 5.0kb upstream 5.0kb upstream 13943 true Tp57577_TGAC_v2_LG2: 24617759-24631701 Trifolium pratense
Tp57577_TGAC_v2_gene12594 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG2: 24626702-24631701 Trifolium pratense
Tp57577_TGAC_v2_gene12594 5.0kb downstream 5.0kb downstream 13943 true Tp57577_TGAC_v2_LG2: 24612759-24626701 Trifolium pratense
Tp57577_TGAC_v2_gene12594 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG2: 24612759-24617758 Trifolium pratense
Tp57577_TGAC_v2_gene12594 10.0kb upstream 10.0kb upstream 18943 true Tp57577_TGAC_v2_LG2: 24617759-24636701 Trifolium pratense
Tp57577_TGAC_v2_gene12594 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG2: 24626702-24636701 Trifolium pratense
Tp57577_TGAC_v2_gene12594 10.0kb downstream 10.0kb downstream 18943 true Tp57577_TGAC_v2_LG2: 24607759-24626701 Trifolium pratense
Tp57577_TGAC_v2_gene12594 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG2: 24607759-24617758 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301558 5265 Fabidae View MSA
124068211 5270 Rosid View MSA
123737665 5271 Pentapetalae View MSA
122791643 5272 Eudicot View MSA
122047962 5273 Angiosperm View MSA
121348672 5274 Embryophyte View MSA
123428872 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain