Gene : Tp57577_TGAC_v2_gene12687 T. pratense v2
Defline:  (1 of 2) PTHR23068//PTHR23068:SF11 - DNA CYTOSINE-5- -METHYLTRANSFERASE 3-RELATED // SUBFAMILY NOT NAMED Genomic Order:  2616
Name:  ? Tp57577_TGAC_v2_gene12687 Secondary Identifier:  ? PAC:35970856
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene12687 0.5kb upstream 0.5kb upstream 7076 true Tp57577_TGAC_v2_LG2: 24423517-24430592 Trifolium pratense
Tp57577_TGAC_v2_gene12687 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG2: 24430093-24430592 Trifolium pratense
Tp57577_TGAC_v2_gene12687 0.5kb downstream 0.5kb downstream 7076 true Tp57577_TGAC_v2_LG2: 24423017-24430092 Trifolium pratense
Tp57577_TGAC_v2_gene12687 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG2: 24423017-24423516 Trifolium pratense
Tp57577_TGAC_v2_gene12687 1.0kb upstream 1.0kb upstream 7576 true Tp57577_TGAC_v2_LG2: 24423517-24431092 Trifolium pratense
Tp57577_TGAC_v2_gene12687 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG2: 24430093-24431092 Trifolium pratense
Tp57577_TGAC_v2_gene12687 1.0kb downstream 1.0kb downstream 7576 true Tp57577_TGAC_v2_LG2: 24422517-24430092 Trifolium pratense
Tp57577_TGAC_v2_gene12687 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG2: 24422517-24423516 Trifolium pratense
Tp57577_TGAC_v2_gene12687 2.0kb upstream 2.0kb upstream 8576 true Tp57577_TGAC_v2_LG2: 24423517-24432092 Trifolium pratense
Tp57577_TGAC_v2_gene12687 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG2: 24430093-24432092 Trifolium pratense
Tp57577_TGAC_v2_gene12687 2.0kb downstream 2.0kb downstream 8576 true Tp57577_TGAC_v2_LG2: 24421517-24430092 Trifolium pratense
Tp57577_TGAC_v2_gene12687 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG2: 24421517-24423516 Trifolium pratense
Tp57577_TGAC_v2_gene12687 5.0kb upstream 5.0kb upstream 11576 true Tp57577_TGAC_v2_LG2: 24423517-24435092 Trifolium pratense
Tp57577_TGAC_v2_gene12687 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG2: 24430093-24435092 Trifolium pratense
Tp57577_TGAC_v2_gene12687 5.0kb downstream 5.0kb downstream 11576 true Tp57577_TGAC_v2_LG2: 24418517-24430092 Trifolium pratense
Tp57577_TGAC_v2_gene12687 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG2: 24418517-24423516 Trifolium pratense
Tp57577_TGAC_v2_gene12687 10.0kb upstream 10.0kb upstream 16576 true Tp57577_TGAC_v2_LG2: 24423517-24440092 Trifolium pratense
Tp57577_TGAC_v2_gene12687 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG2: 24430093-24440092 Trifolium pratense
Tp57577_TGAC_v2_gene12687 10.0kb downstream 10.0kb downstream 16576 true Tp57577_TGAC_v2_LG2: 24413517-24430092 Trifolium pratense
Tp57577_TGAC_v2_gene12687 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG2: 24413517-24423516 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304849 5265 Fabidae View MSA
124066884 5270 Rosid View MSA
123739152 5271 Pentapetalae View MSA
122785997 5272 Eudicot View MSA
122049231 5273 Angiosperm View MSA
121350699 5274 Embryophyte View MSA
123381851 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain