Gene : Tp57577_TGAC_v2_gene12549 T. pratense v2
Defline:  (1 of 39) PF01357//PF03330 - Pollen allergen (Pollen_allerg_1) // Rare lipoprotein A (RlpA)-like double-psi beta-barrel (DPBB_1) Genomic Order:  2676
Name:  ? Tp57577_TGAC_v2_gene12549 Secondary Identifier:  ? PAC:35972091
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene12549 0.5kb upstream 0.5kb upstream 2547 true Tp57577_TGAC_v2_LG2: 24803032-24805578 Trifolium pratense
Tp57577_TGAC_v2_gene12549 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG2: 24803032-24803531 Trifolium pratense
Tp57577_TGAC_v2_gene12549 0.5kb downstream 0.5kb downstream 2547 true Tp57577_TGAC_v2_LG2: 24803532-24806078 Trifolium pratense
Tp57577_TGAC_v2_gene12549 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG2: 24805579-24806078 Trifolium pratense
Tp57577_TGAC_v2_gene12549 1.0kb upstream 1.0kb upstream 3047 true Tp57577_TGAC_v2_LG2: 24802532-24805578 Trifolium pratense
Tp57577_TGAC_v2_gene12549 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG2: 24802532-24803531 Trifolium pratense
Tp57577_TGAC_v2_gene12549 1.0kb downstream 1.0kb downstream 3047 true Tp57577_TGAC_v2_LG2: 24803532-24806578 Trifolium pratense
Tp57577_TGAC_v2_gene12549 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG2: 24805579-24806578 Trifolium pratense
Tp57577_TGAC_v2_gene12549 2.0kb upstream 2.0kb upstream 4047 true Tp57577_TGAC_v2_LG2: 24801532-24805578 Trifolium pratense
Tp57577_TGAC_v2_gene12549 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG2: 24801532-24803531 Trifolium pratense
Tp57577_TGAC_v2_gene12549 2.0kb downstream 2.0kb downstream 4047 true Tp57577_TGAC_v2_LG2: 24803532-24807578 Trifolium pratense
Tp57577_TGAC_v2_gene12549 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG2: 24805579-24807578 Trifolium pratense
Tp57577_TGAC_v2_gene12549 5.0kb upstream 5.0kb upstream 7047 true Tp57577_TGAC_v2_LG2: 24798532-24805578 Trifolium pratense
Tp57577_TGAC_v2_gene12549 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG2: 24798532-24803531 Trifolium pratense
Tp57577_TGAC_v2_gene12549 5.0kb downstream 5.0kb downstream 7047 true Tp57577_TGAC_v2_LG2: 24803532-24810578 Trifolium pratense
Tp57577_TGAC_v2_gene12549 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG2: 24805579-24810578 Trifolium pratense
Tp57577_TGAC_v2_gene12549 10.0kb upstream 10.0kb upstream 12047 true Tp57577_TGAC_v2_LG2: 24793532-24805578 Trifolium pratense
Tp57577_TGAC_v2_gene12549 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG2: 24793532-24803531 Trifolium pratense
Tp57577_TGAC_v2_gene12549 10.0kb downstream 10.0kb downstream 12047 true Tp57577_TGAC_v2_LG2: 24803532-24815578 Trifolium pratense
Tp57577_TGAC_v2_gene12549 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG2: 24805579-24815578 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027787 5273 Angiosperm View MSA
122312203 5265 Fabidae View MSA
124069936 5270 Rosid View MSA
123745991 5271 Pentapetalae View MSA
122796548 5272 Eudicot View MSA
123429074 5275 Viridiplantae View MSA
121297395 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain