Gene : Tp57577_TGAC_v2_gene12553 T. pratense v2
Defline:  (1 of 1) PTHR15629:SF2 - SH3 DOMAIN-CONTAINING YSC84-LIKE PROTEIN 1 Genomic Order:  2694
Name:  ? Tp57577_TGAC_v2_gene12553 Secondary Identifier:  ? PAC:35970760
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene12553 0.5kb upstream 0.5kb upstream 4129 true Tp57577_TGAC_v2_LG2: 24929173-24933301 Trifolium pratense
Tp57577_TGAC_v2_gene12553 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG2: 24932802-24933301 Trifolium pratense
Tp57577_TGAC_v2_gene12553 0.5kb downstream 0.5kb downstream 4129 true Tp57577_TGAC_v2_LG2: 24928673-24932801 Trifolium pratense
Tp57577_TGAC_v2_gene12553 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG2: 24928673-24929172 Trifolium pratense
Tp57577_TGAC_v2_gene12553 1.0kb upstream 1.0kb upstream 4629 true Tp57577_TGAC_v2_LG2: 24929173-24933801 Trifolium pratense
Tp57577_TGAC_v2_gene12553 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG2: 24932802-24933801 Trifolium pratense
Tp57577_TGAC_v2_gene12553 1.0kb downstream 1.0kb downstream 4629 true Tp57577_TGAC_v2_LG2: 24928173-24932801 Trifolium pratense
Tp57577_TGAC_v2_gene12553 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG2: 24928173-24929172 Trifolium pratense
Tp57577_TGAC_v2_gene12553 2.0kb upstream 2.0kb upstream 5629 true Tp57577_TGAC_v2_LG2: 24929173-24934801 Trifolium pratense
Tp57577_TGAC_v2_gene12553 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG2: 24932802-24934801 Trifolium pratense
Tp57577_TGAC_v2_gene12553 2.0kb downstream 2.0kb downstream 5629 true Tp57577_TGAC_v2_LG2: 24927173-24932801 Trifolium pratense
Tp57577_TGAC_v2_gene12553 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG2: 24927173-24929172 Trifolium pratense
Tp57577_TGAC_v2_gene12553 5.0kb upstream 5.0kb upstream 8629 true Tp57577_TGAC_v2_LG2: 24929173-24937801 Trifolium pratense
Tp57577_TGAC_v2_gene12553 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG2: 24932802-24937801 Trifolium pratense
Tp57577_TGAC_v2_gene12553 5.0kb downstream 5.0kb downstream 8629 true Tp57577_TGAC_v2_LG2: 24924173-24932801 Trifolium pratense
Tp57577_TGAC_v2_gene12553 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG2: 24924173-24929172 Trifolium pratense
Tp57577_TGAC_v2_gene12553 10.0kb upstream 10.0kb upstream 13629 true Tp57577_TGAC_v2_LG2: 24929173-24942801 Trifolium pratense
Tp57577_TGAC_v2_gene12553 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG2: 24932802-24942801 Trifolium pratense
Tp57577_TGAC_v2_gene12553 10.0kb downstream 10.0kb downstream 13629 true Tp57577_TGAC_v2_LG2: 24919173-24932801 Trifolium pratense
Tp57577_TGAC_v2_gene12553 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG2: 24919173-24929172 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311551 5265 Fabidae View MSA
124061750 5270 Rosid View MSA
123737814 5271 Pentapetalae View MSA
122792588 5272 Eudicot View MSA
122046278 5273 Angiosperm View MSA
121345874 5274 Embryophyte View MSA
123426176 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain