Gene : Tp57577_TGAC_v2_gene12562 T. pratense v2

Defline:  (1 of 1) K09705 - hypothetical protein (K09705) Genomic Order:  2724
Name:  ? Tp57577_TGAC_v2_gene12562 Secondary Identifier:  ? PAC:35972208

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene12562 0.5kb upstream 0.5kb upstream 2220 true Tp57577_TGAC_v2_LG2: 25160322-25162541 Trifolium pratense
Tp57577_TGAC_v2_gene12562 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG2: 25160322-25160821 Trifolium pratense
Tp57577_TGAC_v2_gene12562 0.5kb downstream 0.5kb downstream 2220 true Tp57577_TGAC_v2_LG2: 25160822-25163041 Trifolium pratense
Tp57577_TGAC_v2_gene12562 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG2: 25162542-25163041 Trifolium pratense
Tp57577_TGAC_v2_gene12562 1.0kb upstream 1.0kb upstream 2720 true Tp57577_TGAC_v2_LG2: 25159822-25162541 Trifolium pratense
Tp57577_TGAC_v2_gene12562 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG2: 25159822-25160821 Trifolium pratense
Tp57577_TGAC_v2_gene12562 1.0kb downstream 1.0kb downstream 2720 true Tp57577_TGAC_v2_LG2: 25160822-25163541 Trifolium pratense
Tp57577_TGAC_v2_gene12562 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG2: 25162542-25163541 Trifolium pratense
Tp57577_TGAC_v2_gene12562 2.0kb upstream 2.0kb upstream 3720 true Tp57577_TGAC_v2_LG2: 25158822-25162541 Trifolium pratense
Tp57577_TGAC_v2_gene12562 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG2: 25158822-25160821 Trifolium pratense
Tp57577_TGAC_v2_gene12562 2.0kb downstream 2.0kb downstream 3720 true Tp57577_TGAC_v2_LG2: 25160822-25164541 Trifolium pratense
Tp57577_TGAC_v2_gene12562 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG2: 25162542-25164541 Trifolium pratense
Tp57577_TGAC_v2_gene12562 5.0kb upstream 5.0kb upstream 6720 true Tp57577_TGAC_v2_LG2: 25155822-25162541 Trifolium pratense
Tp57577_TGAC_v2_gene12562 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG2: 25155822-25160821 Trifolium pratense
Tp57577_TGAC_v2_gene12562 5.0kb downstream 5.0kb downstream 6720 true Tp57577_TGAC_v2_LG2: 25160822-25167541 Trifolium pratense
Tp57577_TGAC_v2_gene12562 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG2: 25162542-25167541 Trifolium pratense
Tp57577_TGAC_v2_gene12562 10.0kb upstream 10.0kb upstream 11720 true Tp57577_TGAC_v2_LG2: 25150822-25162541 Trifolium pratense
Tp57577_TGAC_v2_gene12562 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG2: 25150822-25160821 Trifolium pratense
Tp57577_TGAC_v2_gene12562 10.0kb downstream 10.0kb downstream 11720 true Tp57577_TGAC_v2_LG2: 25160822-25172541 Trifolium pratense
Tp57577_TGAC_v2_gene12562 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG2: 25162542-25172541 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299495 5265 Fabidae View MSA
124063762 5270 Rosid View MSA
123736862 5271 Pentapetalae View MSA
122786910 5272 Eudicot View MSA
122051010 5273 Angiosperm View MSA
121346638 5274 Embryophyte View MSA
123426052 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain